Lacrimispora sinapis: VIG27_00950
Help
Entry
VIG27_00950 CDS
T10884
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia03030
DNA replication
lsia03430
Mismatch repair
lsia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VIG27_00950 (dnaX)
03430 Mismatch repair
VIG27_00950 (dnaX)
03440 Homologous recombination
VIG27_00950 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsia03032
]
VIG27_00950 (dnaX)
03400 DNA repair and recombination proteins [BR:
lsia03400
]
VIG27_00950 (dnaX)
Enzymes [BR:
lsia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VIG27_00950 (dnaX)
DNA replication proteins [BR:
lsia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VIG27_00950 (dnaX)
DNA repair and recombination proteins [BR:
lsia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VIG27_00950 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
TIP49
AAA_5
AAA_30
AAA_assoc_2
AAA_7
RCF1-5-like_lid
AAA_16
Mg_chelatase
ResIII
AAA_14
AAA_18
AAA_19
DUF815
AAA_24
DUF6185
Motif
Other DBs
NCBI-ProteinID:
XIJ21461
LinkDB
All DBs
Position
189807..191378
Genome browser
AA seq
523 aa
AA seq
DB search
MSYTALYRKWRPSSFADVKGQDHIVQTLKNQIVSARIGHAYLFCGTRGTGKTSIAKIFAK
AVNCEAPKDGSPCGECATCKSIAAGASLNVVEIDAASNNGVENIREIRDQVQYPPTEGKY
RVYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTEVQKIPVTVLSRCQRYDFKRITV
ETIAEHLKGLTAAEHIQVEDRALTYIAKAADGALRDALSLLDQCIAFHYGEILTYDNVLD
VLGAVDITVYGKLFRAVTDNRTRDCITCLEELVIQGRELGQFVVDFIWYLRNLLILKSVD
DGDALLDMSTENQAILKEYSARADQETLLRYIRVFSDLSNQLRYASQKRVLIEVALIKLT
RPQMEQNLDSLIERIKSIEKQLENGVVSKAAPQAAAPAPAEELTPAERVTLPKGQLEDLN
LIRSEWGKIIRELGGPIRASFRDTVVEPAGESCLCVVFSDQSNYMIGSRDTTVSEIERYV
EDHYKKSIAFKTRLRGGGERLDTIYVSDEELKANILMDITIEE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatacggcattgtatcggaaatggcgcccctcttcctttgcggatgtaaaggga
caggaccatatcgtacagacattgaaaaaccagatcgtatccgcgcgtatcggacatgcg
tatctgttttgcggaaccagaggaaccggtaagaccagtattgcaaagatttttgcaaaa
gcggtcaactgcgaagcgccaaaggatggcagtccctgcggggaatgtgcgacctgtaaa
agcattgcagccggagcttccttgaatgtggttgagattgatgctgcgtccaataacggt
gtggagaacatcagagagatcagagatcaggtccagtatcctccaacagaagggaaatac
cgggtttatatcattgatgaggttcatatgctttctacaggggcatttaatgcactgcta
aagactctggaagaaccgccgtcctatgtcatattcatcctggcaacgacggaagttcag
aagattcctgtgacggttctttcccggtgccagagatatgatttcaagcgtattacggta
gagaccattgcagaacatttaaaaggtcttacagccgcagaacacatacaagtggaagac
agagcccttacttatatcgcaaaggctgcggacggtgcccttcgtgacgccctcagcctt
ttggaccagtgcatcgcctttcattacggagagatccttacctatgataatgtactggat
gtgcttggagccgtggatatcaccgtatacggaaagctgtttcgtgcggtcacagacaac
cggaccagggattgtattacctgcctggaagaactggtgatccagggcagggaattgggc
cagtttgtggtggattttatctggtatttaagaaatctgctgattttaaaatccgttgac
gacggagacgcactgctcgatatgtcaacggaaaaccaggccattttaaaagaatacagt
gcccgggcagaccaggagacccttctccgttatatccgggtgttctccgatttatccaac
cagcttcgctatgcatcccagaaacgggttctcattgaagtggccctcataaaattgacc
cgcccccagatggaacagaatttggattctctgatcgaacggatcaaaagcattgaaaag
cagctggagaacggtgtggtatcaaaagcagcccctcaggcagcggctccggcaccggcc
gaggaactgactcccgcagaacgggtcacgcttccaaaaggacagctggaggatttgaat
ctgatccgcagtgaatggggaaagatcattcgggaattaggcggtcctatccgggccagt
ttccgggataccgtagtcgagcccgcaggcgaaagctgcctgtgcgtggtattttcagat
cagagcaactacatgatcggaagccgggatactactgtttcagagattgagcggtatgtg
gaagaccattacaaaaagtccattgcctttaagacaagactccggggaggaggcgaaagg
ctggacacgatatacgtcagtgacgaagaattaaaagcgaatattttaatggacattaca
atagaagaataa
DBGET
integrated database retrieval system
