Lacrimispora sinapis: VIG27_01260
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Entry
VIG27_01260 CDS
T10884
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
lsia Lacrimispora sinapis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_01260
Transporters [BR:
lsia02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
VIG27_01260
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Gene cluster
GFIT
Motif
Pfam:
MatE
MurJ
Polysacc_synt
SecE
Motif
Other DBs
NCBI-ProteinID:
XIJ21512
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Position
complement(255703..257043)
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AA seq
446 aa
AA seq
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MDKEYLINDKPARALAFFTFPMIIGNLFQQFYTMADSVIVGRFVSEDALAAIGASYSFTN
VFICIAIGGGVGATVITSHYLGARNYKKMIQSTGTALISFLILSIVLAVVGLVFGRTFMI
YLNTPANILTMASDYLEIYFWGLPFLFMYNIISAIFNAIGKSRIPLYLLIFSSLLNIALA
VFMVYSLGLGVKGAAWATFLAQGVSVVLSFLLLVREFKKYYSYLDTAFDTSAFTEMSKVA
LPSILQQSTVAIGMLLVQSVVNSFGSEVLAGFSSAMRVESLFIVPMAAIGNAMSSYTAQN
LGAGKQDRVQKGFRAANGYILFFAVITCIILEFFHTPIVGLFLGGGGTELAYQTGTGYLR
FMGFFFILIGLKMSTDGLLRGAADMKMFTIANLANLSLRVIFALTMAPRFGVAMVWYAVP
MGWFVNLLISYLQYLTGKWKTIRTSR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggagtatctaatcaatgataaaccggccagagcactggctttttttaccttt
cctatgatcataggcaatttgtttcaacagttttataccatggctgattctgtcatcgtg
ggccgttttgtaagtgaagatgcacttgcggcgatcggggcatcttattcctttaccaac
gtttttatctgcattgccatcggaggcggtgtgggagcaaccgttatcaccagccattat
ttaggggcccgcaattataagaaaatgatacagtccaccggtacggctcttatatccttt
cttatattaagcattgttttggccgtggtggggctggtctttggccggacctttatgata
tatttaaataccccggcaaacatccttacgatggcttcggactaccttgagatttacttc
tggggacttccgtttttatttatgtataatatcatttccgctatttttaatgccatcgga
aaatcccggatacctttatatcttttgattttttcctccctgttaaacatcgctttggct
gtttttatggtatacagcctgggactgggggtaaaaggggcggcatgggccacctttctg
gcacagggcgtgtctgtggtactttcctttcttttgctggttcgggaatttaaaaaatat
tactcctatttggatacggcgtttgatacttccgcctttaccgagatgtcaaaggtggcg
ctgccctccattctccagcagtccaccgtggccatcggcatgcttttggtccagtctgtg
gtaaacagcttcggaagcgaggtgctggcaggattttcctctgccatgcgggtggaaagt
cttttcatcgtccccatggctgccatcggcaatgccatgtcctcctacaccgcacagaat
ctgggggcaggaaaacaggaccgggtgcagaaaggcttccgggcggcaaacggatatatt
ctattctttgcagtcattacctgcatcatactggaattcttccacacgccaatcgtaggc
ttgttcctgggcggaggcggaaccgagctggcatatcagaccggaaccggatacttacgg
tttatgggcttctttttcattctgatcggacttaagatgagtaccgacggactgctaaga
ggtgctgccgacatgaagatgtttaccattgcaaaccttgcaaacctgtcactgagagtc
atctttgccctgactatggcaccacgctttggagttgccatggtatggtatgccgttccc
atgggatggtttgtgaacctgttgatctcttacctgcagtaccttaccgggaaatggaaa
acaatccgcaccagcagataa
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