Lacrimispora sinapis: VIG27_01505
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Entry
VIG27_01505 CDS
T10884
Name
(GenBank) glycosyl hydrolase family 18 protein
Organism
lsia Lacrimispora sinapis
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
SH3_3
SH3_16
Cu_amine_oxidN1
SH3_4
TIM-barrel_EndoS
Motif
Other DBs
NCBI-ProteinID:
XIJ21559
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Position
313449..315110
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AA seq
553 aa
AA seq
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MNRKAVPVLVALGLILAVIAGFFGVRFLERYIPTNEQADRTQLLGVKENEVALYLNEELQ
EAKGIFMEGQTYLPIDWVNSNLNERFYWDRMEKLLVYALPDSIVYADHTTKGTTGKPLIW
VNGDGVYLSVGLVANYTDIRVAAYDGARNKRMFINNKWDPVTVATVKKNGNVRVKGGVKS
PIVTWISKGNKVTVLESMGRWDKVRTEDGFVGYVKHRRLGKFSDETPVSTFKAPVYKNIS
MDEPVSLAWHQMTTPAGNASFDRVTASMKGVNVISPTWYELTDNEGNYRSLADAEYVKKA
HNKGLKVWALISNFSKDVNTEILLAKTSTRRRLIESLMAETEKYGFDGINLDFEGIKEEA
GVPYIQFIRELSIFCREKGIVLSVDNYVPVPGNEFYNRKEQGIVADYVIVMGYDEHYAGG
DAGSVASLSYVENGIKDTLLEVPKEKIIQALPFYTRVWTVDSGNKTSSSSLGIAKAKEWV
SENKVKLQWLNESGQYYGELQTKEGIKKIWMEEERSIGLKMDLIRRYDLAGVAFWKLGFE
PADLWDVVQLEKK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaaagctgtgccggttctcgtggcgctgggattgattttggcggtaattgcc
ggatttttcggagtccggttcctggaacggtatattcccacgaatgagcaggcagatagg
acacaactgcttggtgtaaaagagaatgaagtagccctttatttaaatgaggaattacag
gaagcaaaaggaattttcatggaagggcagacgtatcttcctattgattgggtaaatagt
aacttgaatgaacgtttttactgggacagaatggaaaaacttctggtatatgctctgccg
gattccattgtatatgcagatcataccaccaaaggtaccaccgggaaacctctcatatgg
gtgaatggagacggagtctatttatctgtgggactggtggccaattataccgatatccgc
gtggcagcatatgacggcgccagaaataagcggatgtttataaataataagtgggacccc
gtaactgtggcgacggtcaaaaaaaacggcaatgtacgggtaaaaggaggcgtgaaaagc
cccatcgtgacatggatttcaaaaggaaataaggtcacggttttagaatccatgggacgg
tgggataaggtccggacagaagacggctttgtgggttatgtaaagcaccgccgtctcggt
aagtttagtgacgagactcctgtcagtacctttaaagcacctgtttataaaaatatttcg
atggatgagccggtaagccttgcctggcatcagatgacgactcctgcgggcaatgcctcc
tttgaccgcgtgaccgcaagtatgaaaggggtcaatgtcatctcccccacctggtatgaa
ctgacggataatgaagggaattaccgttccctggctgatgcagaatatgtgaaaaaggct
cataacaaggggctgaaggtgtgggctctgattagtaatttcagcaaggatgtaaacacg
gagattcttttagcaaagacctccaccagacgaagactcattgagtccctgatggcagaa
acagaaaaatacggatttgacggaatcaatctggactttgaaggaatcaaagaagaggca
ggagttccctacatacagtttatccgggagctgtccattttctgcagagagaaggggatc
gttctgtctgtagataactatgtcccggtgcccggcaatgagttttataaccggaaagag
cagggaattgtagctgattatgtgattgtcatgggatatgatgaacactatgccggaggg
gatgccggttctgtggcctcccttagctatgtagagaacggaatcaaagacacgctttta
gaggtgccaaaagaaaagatcatacaggccctccccttttataccagagtgtggaccgtg
gacagcgggaataagacctcatcctcttctttgggaatagcaaaagccaaagaatgggtc
agtgaaaacaaggtgaagcttcaatggcttaatgagtcaggccagtattacggagaattg
cagacaaaggaaggtattaaaaagatctggatggaggaagaacgctccatcgggcttaag
atggatttgatccggcggtatgatctggccggagtggccttctggaagctggggtttgaa
ccggcagatctctgggacgtggtccagctggaaaagaaataa
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