Lacrimispora sinapis: VIG27_01740
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Entry
VIG27_01740 CDS
T10884
Name
(GenBank) extracellular solute-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIG27_01740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_01740
Transporters [BR:
lsia02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
VIG27_01740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
XIJ21602
LinkDB
All DBs
Position
376423..378099
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AA seq
558 aa
AA seq
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MKKRVLAMMYAAAAAAILSGCSGSATDAAAEKTPQVVEDKDLDYEYGAGVTFHSNEPVSY
SMMFSDHENYPYKADWRLWSAIEEKTNVAFDLTTVARTDYNDKVSALVNTGGAPYIIPKI
YDASPFVDSGQVVPISDWVQYMPNYQKCVKDWGMEEDLTRILSSNGKYYRLPGLWEKAAG
GYSFLIRKDVFEAAGVDVENEEKNWTWEDFYQACKKVKEHTGADYVWSDQYQLGCAMNLS
GIEYGIRAGNSKDGGDWNLGDGLQFDFDKKEFVFTNTTSDYKDYLKFWNKMYKDGILDPE
TFTQDSEQAKAKFFRGESYVLTCNYQQVADYKAKNRVQADGADLYFTVMPGGPKGQLQPE
SYRLESGIMISQKALKELGDKEFIKMLRFIDWLWYSDEGQTLALWGVEGETYDKQADGTI
VLKPDIYYNGINAGAPKQLNVDFGFGGGVFAYGGSEKLRFSKMTDEEKAWNQRIYDSKEK
RKIEPPILSNEEEKEQMNLIKVPLMDYVNTSALEFITGKLNLDSDWEKYTAECEAKGSGK
YTDMANEIFEKTKDMIGF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagagtattggcaatgatgtatgcagcagcggcagcagctatactgtccggc
tgcagcggttctgcaacggatgcagcggcggaaaagacacctcaagtggtggaagataag
gatctggattatgagtatggggcaggggtgacctttcattccaatgagcctgtttcctat
tccatgatgttttcggatcatgagaattatccttataaggcggactggaggctgtggagc
gccattgaagaaaagaccaatgtggcctttgatttaaccactgtggcaagaacggattat
aatgacaaggtttcagctctggtaaatacaggaggtgctccttatatcattccgaaaata
tacgatgcatctccgtttgtagacagcggtcaggtagttcccatcagcgactgggtgcag
tatatgcctaattaccagaaatgtgtgaaggattggggcatggaagaggatttgaccagg
atactgagttctaatggaaaatattaccgtttgcccggtctgtgggaaaaggcggccgga
ggatattcctttctgatccgaaaggatgtgtttgaagcggctggggtggatgtggagaac
gaggaaaagaattggacctgggaagatttttatcaggcatgcaaaaaggtcaaagagcat
accggggcagattatgtgtggtccgaccagtaccagcttggctgtgctatgaatctttcc
ggcattgaatacggcatccgcgcaggaaattccaaggatggcggagactggaatctggga
gacggccttcaatttgattttgataaaaaggagtttgtctttaccaatacgacaagtgat
tataaagactatttgaagttctggaataaaatgtataaggatgggattctggacccggag
acattcacccaggattcagaacaggcaaaggcaaaattcttccggggagaatcctatgtg
ctgacctgcaattatcagcaggtcgcagattataaagcaaaaaaccgggtccaggcggat
ggagctgacctttatttcacagttatgccgggaggccccaaggggcagcttcagccggaa
agctaccgtctggaaagtgggatcatgatatcccagaaggctttaaaagagcttggagac
aaggaatttataaaaatgctccgttttattgactggctctggtattccgatgaaggccag
acgcttgccttgtggggcgtagaaggagaaacctatgacaaacaggcagatgggaccatt
gtattaaagcctgatatttattataacgggatcaatgccggcgcccccaagcagttaaat
gtggattttggatttgggggaggtgtgtttgcttacggaggcagcgagaagctgcgtttt
tccaaaatgacagacgaagaaaaagcgtggaaccagagaatctatgattccaaggaaaag
cgcaaaatcgaaccgcctattctgtccaatgaagaggaaaaggaacagatgaatttaatt
aaggttcccctgatggattatgtaaatacctctgccctggaattcatcacaggaaagctg
aatttggacagtgactgggagaaatatacggcggaatgtgaagcaaagggaagtgggaaa
tacacggatatggcaaatgagatctttgagaagaccaaagatatgattggattttag
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