Lacrimispora sinapis: VIG27_02605
Help
Entry
VIG27_02605 CDS
T10884
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VIG27_02605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsia03021
]
VIG27_02605
03400 DNA repair and recombination proteins [BR:
lsia03400
]
VIG27_02605
Enzymes [BR:
lsia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VIG27_02605
Transcription machinery [BR:
lsia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VIG27_02605
DNA repair and recombination proteins [BR:
lsia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VIG27_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
RAD51D_N
MukB
Motif
Other DBs
NCBI-ProteinID:
XIJ21769
LinkDB
All DBs
Position
578461..579429
Genome browser
AA seq
322 aa
AA seq
DB search
MFDFEKPNIEIAEISEDKKYGKFVVEPLERGYGTTLGNSLRRIMLSSLPGAAVSQVKIDG
VLHEFSSIPGVKEDVTEIIMNIKSLSIKNNSDTNEAKVAYIEFEGEGVVTAADIQADPDI
EIMNPEQVIATLSGGTDSKFYMELTITKGRGYVSADKNKSEDLPIGVIAVDSIYTPVERV
NMTVQNTRVGQVTDYDKLTLDVYTNGTLAPDEAVSLAAKVLSEHLNLFIDLSENAKTAEV
MVEKEDNEKEKVLEMNIDELELSVRSYNCLKRAGINTVEELCNRTSEDMMKVRNLGRKSL
EEVLAKLKELGLQLNPSDDTNA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgattttgaaaaaccaaacattgagattgctgagatctcagaagataaaaaatat
ggcaagtttgtagttgaaccgcttgaaagaggttatggcacgactttaggtaattcctta
agaagaatcatgctttcttccctaccgggcgctgcagttagtcaggtaaaaatcgacggc
gttttgcatgagttcagttccatcccaggcgttaaagaagatgtgactgagatcattatg
aacatcaagagcttatctattaagaataatagcgataccaacgaagcaaaagttgcttac
atcgagtttgaaggcgaaggtgttgtgacggctgccgatatccaggcggatcctgatatt
gagatcatgaacccggaacaggtaatcgctacccttagtggcggtacagacagcaagttc
tatatggaacttacgattaccaagggccgcggctacgtgagtgcagacaagaataaaagt
gaagatttaccaatcggagttattgccgttgattccatctatacaccagtagaacgcgtc
aacatgacggtacaaaacacacgagtaggtcaggtcactgattatgataagttgacatta
gatgtatacacaaatggtactttggcgccagatgaggcagtaagccttgcagctaaagtt
ctgagtgagcatttaaacctgttcattgatttatctgagaacgctaagactgctgaagtc
atggtggagaaagaagacaatgaaaaggagaaagtacttgagatgaacattgatgaactg
gagctttctgtccgttcatacaattgtcttaagagagctggaatcaataccgttgaagaa
ttgtgcaaccgcacttccgaggatatgatgaaggttcgtaatcttggccgtaagtcatta
gaagaagtgttggccaagttaaaagagctgggcttacagcttaatccaagcgacgatacc
aacgcataa
DBGET
integrated database retrieval system
