Lacrimispora sinapis: VIG27_02785
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Entry
VIG27_02785 CDS
T10884
Name
(GenBank) DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia03410
Base excision repair
Brite
Enzymes [BR:
lsia01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VIG27_02785
DNA repair and recombination proteins [BR:
lsia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VIG27_02785
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XIJ21803
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Position
614823..615707
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AA seq
294 aa
AA seq
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MYRIQINDMDLEQIARSGQCFRIGKREEHKDIFSIAAGEHYVEAVKEGDHFLFSCSETDF
HRIWAGYFDLQTDYGGYKSHVASDDSYLREAVKWGWGVRILQQDLWEMIITFLISQNNSI
TRIRGSVEKLCSLLGEKKSGIGFAFLPDKSLIETKRTYQTFPKPEAIAKAGLSGLSSMGL
GYRDKYILSMGEFCSGQEGKAWLETLKEAEYKDAHEMLKHQYGIGKKVADCICLFGLHHV
GAFPVDTHVKQILESHYPQGFPLERYQGYAGILQQYMFYYKVNDVHSRKSIPSL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtaccggatacagataaacgatatggacttagaacagatagcccggtccggccagtgc
ttccgcattgggaaaagggaggaacataaggatatcttttccattgcggcgggggaacac
tatgtggaggcagtgaaggaaggagaccactttcttttttcctgcagcgaaacggatttt
caccgcatctgggccggatactttgacttacagaccgattacggtggctataaaagccat
gtggcttcggacgattcctacttacgggaagccgtgaaatggggctggggagtccggata
ttacagcaggatttatgggaaatgatcattacttttttgatttcccagaacaacagcatc
acccggatcagaggcagcgtggaaaagctctgctctctgttgggggagaagaagtctggc
attggctttgcctttttgccggataaaagcctgattgagacgaaacggacctaccagaca
tttcccaagccggaggccattgcaaaggccggcctttccggactttcttccatggggctg
ggataccgggataaatatatcctgtctatgggagagttttgcagcgggcaggaaggaaag
gcatggcttgaaacactgaaagaggcagaatataaggacgcccatgaaatgctcaagcat
caatacggcattgggaaaaaggtggcggactgcatctgtctgttcggactgcatcatgtg
ggagcctttcccgtggatactcatgtgaagcagatcctggagtctcattatccccagggc
tttccgttagagcggtatcaggggtatgcggggattctgcagcagtatatgttttattac
aaggtaaacgatgtacattccagaaaatctattccttccttatag
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