Lacrimispora sinapis: VIG27_03175
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Entry
VIG27_03175 CDS
T10884
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VIG27_03175 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsia03400
]
VIG27_03175 (ung)
Enzymes [BR:
lsia01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VIG27_03175 (ung)
DNA repair and recombination proteins [BR:
lsia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VIG27_03175 (ung)
Prokaryotic type
VIG27_03175 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XIJ21870
LinkDB
All DBs
Position
696545..697222
Genome browser
AA seq
225 aa
AA seq
DB search
MGAIENDWLAPLSGEFKKPYYRELYQKVKKEYETGRVFPEPDDIFNAFQFTPLSKVKAVI
LGQDPYHNFGQAHGLCFSVKPDVDIPPSLVNIYQELRDDLGCEIPNHGYLKKWSDQGVML
LNTVLTVRAHAANSHQGIGWEKFTDAAIRILNEQDRPMVFLLWGRPAQNKKSMLTNPRHL
ILEAPHPSPLSAYRGFFGCKHFSKTNAFLEANGVTPIDWQIENIE
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaattgagaacgattggctggccccgttgagcggggagtttaaaaagccgtat
tacagggaactttatcagaaagtgaagaaagaatatgaaacgggcagggtttttccggaa
cccgatgatattttcaatgcctttcagtttacacctctttccaaggtaaaggcagtgatc
ttaggtcaggacccttatcacaattttggtcaggcccacgggctgtgtttttccgtaaag
ccggatgtggatattcctccgtctcttgtgaatatctatcaggaattgcgggatgattta
ggatgtgagatccccaaccacggttatttaaaaaagtggtcggatcagggcgtcatgctt
ttgaacacggtgctgaccgttcgtgcccatgcggccaattcccatcagggaatcggctgg
gagaaatttacggatgcggccatccggattctcaatgaacaggaccgtcccatggtattt
ctcttatgggggcgtccggctcagaacaagaagtcaatgcttaccaatcccaggcatttg
atactggaagcaccccatccaagtccgctttccgcttaccggggattttttggctgtaag
catttcagcaaaacaaatgcctttctggaggccaatggagtgacaccgattgactggcag
attgaaaatattgaataa
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