Lacrimispora sinapis: VIG27_03240
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Entry
VIG27_03240 CDS
T10884
Name
(GenBank) sodium ion-translocating decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia00362
Benzoate degradation
lsia00620
Pyruvate metabolism
lsia00650
Butanoate metabolism
lsia01100
Metabolic pathways
lsia01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
VIG27_03240
00650 Butanoate metabolism
VIG27_03240
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VIG27_03240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_03240
Enzymes [BR:
lsia01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
VIG27_03240
Transporters [BR:
lsia02000
]
Other transporters
Primary active transporters [TC:
3
]
VIG27_03240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
XIJ21883
LinkDB
All DBs
Position
711577..712695
Genome browser
AA seq
372 aa
AA seq
DB search
MSILLEGLLSFTWQQAMMMLIGCALMYLGIKKEYEPTLLVPMGLGTILVNFPMSGIITQQ
STGVEGVLNVLFDAGISTELFPLLIFIGIGAMIDFGPLLQNPFMMLFGAAAQFGIFAVIV
VIVLTTNLSLPEAASMGIIAAADGPTSIFVAGKLAANLLGPITVAAYSYMALVPIIQPPV
IRALTTKKERQIHMKYEPKNVSKTAKILFPLAITFVAGFTAPMSLPLIGFLMFGNLLREC
GVLDRLSASAQNELVNIISILLGLTISLKMTADEFLNFKTLLIIGFGLLGFVFDTAGGVI
FAKILNIFRKEKINPMVGAAGISAFPMSSRVIQKMATKEDPSNFILMHAAGANVSGQIAS
VVAGGLLLSFFM
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagcatattattagaagggctactctcgtttacttggcagcaggcaatgatgatgtta
atcggctgcgccttgatgtatctgggtatcaaaaaagagtatgagccgacacttttagtc
ccgatgggacttggcacaattttggtaaacttcccaatgtccggtattatcacacagcaa
agtactggagttgaaggtgtactgaacgtgttatttgatgccggaatttcaacagaatta
ttcccgcttctgatctttatcggaatcggtgcaatgattgactttggcccgttactgcaa
aacccttttatgatgttgtttggtgctgctgcacagtttggtatttttgcggttatcgtt
gtcattgtattaactacaaatttatctcttccagaagctgcttccatgggtattatcgca
gcagcagacggaccaaccagtatctttgtagctggtaaactggccgctaatttgttagga
ccgattacggtggcggcgtattcatacatggctcttgtgccgatcattcagccgcctgtt
atcagagcactgacaacaaagaaggaacgtcagattcatatgaaatatgaaccaaagaac
gtatccaaaacagcaaagattttattcccgttagcaattacatttgttgcaggttttacg
gcaccaatgtccctgccgctgatcggattcctgatgtttggtaatctgttacgtgagtgc
ggcgttctggatcgtttaagtgcttctgctcagaatgaattagtaaatattatcagtatt
ttacttggtcttacgatttcattaaagatgacagccgatgagttcttaaactttaagact
ctgttaattatcggcttcggtctgttaggtttcgtatttgatactgcaggcggtgttatc
ttcgctaagatcttaaatattttccgtaaggaaaaaatcaatccaatggtcggagcggca
ggtatttccgctttcccaatgagcagccgtgtaattcagaagatggcaacaaaggaagat
ccatcaaactttattctgatgcatgcagccggtgctaacgtttccggtcagatcgcatca
gtagtagcaggcggacttttactttccttcttcatgtaa
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