Lacrimispora sinapis: VIG27_03330
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Entry
VIG27_03330 CDS
T10884
Name
(GenBank) extracellular solute-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIG27_03330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_03330
Transporters [BR:
lsia02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
VIG27_03330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
DUF3502
Motif
Other DBs
NCBI-ProteinID:
XIJ21901
LinkDB
All DBs
Position
complement(734398..735981)
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AA seq
527 aa
AA seq
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MKRTAKLLLFLIFLCSLLTGCDDKNDASPNDQEKVVTILFRGEVSHVEPVLEEFYRRSYD
KLRLRLNIETIPPYTYSDELASRLNASEDADLVFDAPWNGMSTQISNKMYMDLEKYFNND
AYPNLKRAFPPEYLDANRFNGKLYGIPLTKRHLDVSGIYYRKDLLEQYKLGFNEITSQEE
LQKYYDAVLADSRDIYPFASSKRGFFLTHRHSIDLMQNHVYPINGWTDTLFPGYIVLSPD
ERKVEDVVFLGDDDARFSALNTKYNYDFMKSEFRTLAQWNQYIHPDSMALTNSKELFLSG
QAASFESTISSQSDLHDTLKAFIPNAECGFFPADELFNSSDLKPGAIPSNMDAWNYLCIP
WYSKHADEAMSFLDWLFSSQENVDLFELGREGYDWIATSDKEYLPLGNPKLKYSIPSYEL
TWNPNFSRTPASFSPKEKKLLEYTADLRSYRVSPLAGWTLDTKNIAVEVSRLTDLYSRYF
TPFYEGLYGDDTDKYIEEFCRLSGEMGLETVRKEIKTQVQNYLDKGF
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaccgcaaaacttctgctctttctgatatttttatgcagccttctgacaggc
tgcgatgataaaaatgatgcctctccaaatgatcaggaaaaagtggtcacaatcctattc
cgtggggaagtttctcatgttgaaccggtgctggaagaattttaccgccgttcctatgat
aagctccgcctgcgtcttaatattgagaccattcctccttacacctattctgacgagctg
gcctccagactcaatgcttctgaagatgctgatctggtctttgacgcaccatggaacgga
atgagcacccagatctcaaacaaaatgtatatggatctggaaaagtactttaataatgat
gcttaccccaatttaaagcgggcttttcccccggaatacctggatgccaaccgctttaac
ggaaaattatacggcattccccttaccaaaagacatctggatgtttcaggcatctattac
aggaaagacttgctggagcaatataagcttggtttcaatgaaatcaccagccaggaggag
cttcagaagtattatgatgccgtgttagctgacagcagggacatctaccccttcgcttcc
agcaaacggggattttttctcacccaccgtcattccattgatcttatgcagaaccatgtt
taccccattaacggctggaccgataccctgtttccaggatatatcgtactctctcccgat
gagcggaaagtggaagatgtggtatttctaggagatgacgatgcaaggttctcggcttta
aatacaaaatacaattatgactttatgaaatctgaattccgtaccctggcccaatggaac
caatacattcatcctgacagcatggctctgaccaattcaaaggagctgttcctctccgga
caggcagcttcctttgaatcaaccataagcagccagagtgatcttcacgatacgttaaag
gctttcattccgaatgccgaatgcggattctttcccgcagatgagctatttaactcctca
gacttaaaaccaggtgccattccctccaatatggatgcgtggaattatttatgtattccc
tggtattccaaacatgcggatgaggccatgtcctttcttgactggctcttctccagccag
gagaatgtggatctctttgagcttggcagagagggttatgactggattgccacctcggat
aaggaataccttcctttgggcaatcccaagttaaaatattccattccctcctatgaactg
acctggaatcccaatttcagccgtacccccgcctcctttagtcctaaagaaaagaaactg
ctggagtacaccgcggaccttaggagctatcgagtctcaccgttggcaggctggacactg
gatacgaaaaacattgctgttgaggtatcccggctgactgatttatattcccgttatttt
acccccttttatgagggactttacggagatgatacggacaaatacatagaagaattttgc
cggctgtccggcgagatgggactggaaaccgtacggaaagaaataaagacacaggtgcag
aactatctggataaagggttctag
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