Lacrimispora sinapis: VIG27_03350
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Entry
VIG27_03350 CDS
T10884
Name
(GenBank) extracellular solute-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIG27_03350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_03350
Transporters [BR:
lsia02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
VIG27_03350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3502
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
XIJ21905
LinkDB
All DBs
Position
740448..742112
Genome browser
AA seq
554 aa
AA seq
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MKKNLKRLAAMTLTAALAVSVTACSSSKNTGDGAKDPESVSKTAESSGQVPETTLKIYMF
GGAENQDKVLNKFYEQTKDTLNTKLDFVWSPASDYIQNIPLLIQNKQEADLVFDAYWMNL
SKMKNEGAYADISKYFNNDEYPGLKAAFPESVIGQVREPDGAIYTVPLYEVADDQSFCFF
IRKDLREKYHLPEVRDLDTFRQYCDAMEKHKAEEGLVAPIGLAERGFFKFQDRELTRRAN
HIFGIPNTGANATMEIQALLNEEGTKVLAVAGIGDPDEAFAEFPEPFHTNYMDARYVELA
ETWKPYVQKDSNVEQDAKKNLFYTGKVAAVEGALDGYGEVAREIENFTGIKDNVEVFLYD
EVEQKRDKIVKNNLTTNNFLCIPYYSTKIDQTMKFLDWIYSNRANHDLFQYGIEGEDWTA
VGDSQYESLNADNKYVFPGYQLTWNPNYARIEKNLPEKIKDYYENYVNLPDNYTESPIAG
FVFNAGENSEVKRAYAAYTNVQTEYYSTLANGIYGDQTEKVIGEYYKKAQAAGMETVKEA
VKRQLQEYLDSKNK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatttaaaaagactggctgcaatgactcttacagcggctcttgcagtctca
gtcacagcatgcagcagttcaaaaaacacgggggacggagcgaaggacccggaaagcgtc
agtaaaacagcggaaagcagcggccaggtgccggaaacgactcttaagatctatatgttc
ggcggcgcggagaatcaggataaggttctaaataagttttatgaacagacaaaggacacc
cttaatacaaagctggactttgtatggtcgccggcatctgattatatccagaacatcccg
ctgctgattcagaacaagcaggaggcagatcttgtctttgatgcttactggatgaattta
tccaaaatgaagaatgaaggtgcttatgcggacatttccaagtactttaataatgatgaa
tatccaggcttaaaggcagcgttcccggaatcggtgattggtcaggtaagagaacctgac
ggggcaatttatacggtgcctctctatgaggtggcagatgaccagtccttttgcttcttt
atcagaaaggatttaagagaaaagtatcacctgccggaggtcagggatttggataccttc
cgccagtattgtgatgcaatggaaaaacataaggcagaggaaggcctggtggctcccatc
ggtctggcagaacgtggatttttcaagttccaggacagagagctgacaagaagggccaat
cacatatttggcattccaaacaccggcgccaatgcgaccatggagatccaggcgctgctg
aatgaagaaggaacgaaagtgctggcggtagcaggaatcggtgatccggatgaggcattt
gcagaattcccggaaccgtttcataccaattatatggatgcccgctatgtggaactggca
gaaacgtggaagccctatgtgcagaaggactcaaacgtagagcaggatgccaaaaagaac
ttattctataccggaaaggtggcagcagtggaaggcgccctggacggctatggggaagta
gcgagagaaattgaaaattttacaggaataaaggataatgtagaagtattcctgtatgat
gaggtagagcagaagagggataagatcgtaaaaaacaacttaaccaccaacaactttttg
tgtattccttactattccaccaaaatcgaccagaccatgaagttccttgactggatctat
tccaacagagccaaccacgacctgttccagtatggcatagaaggggaggactggactgcg
gtaggagacagccagtatgaatccttaaatgcagacaacaaatatgtattccctggctat
cagctgacatggaaccctaattatgcccggattgagaaaaatcttccggagaagatcaag
gattattatgaaaactatgtcaatctgcctgataactatacagagtcccccattgccgga
tttgtattcaatgcaggcgaaaattcggaagtaaagagagcgtatgcggcctataccaat
gtacagaccgagtactattccacactggccaatggcatttacggggatcagaccgagaag
gtaatcggtgaatactataagaaggcacaggcggccggaatggagaccgtcaaggaagcg
gtgaaaagacagcttcaggagtatctggattcaaaaaacaaataa
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