Lacrimispora sinapis: VIG27_03540
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Entry
VIG27_03540 CDS
T10884
Name
(GenBank) extracellular solute-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIG27_03540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_03540
Transporters [BR:
lsia02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
VIG27_03540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
DUF8063
Motif
Other DBs
NCBI-ProteinID:
XIJ21941
LinkDB
All DBs
Position
784493..786076
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AA seq
527 aa
AA seq
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MRVKKMLAAGMAVTMAASVALSGCSSSSGSKTTGEATNAESGSAAGKTASGEVKKPEKIT
IMVNGTVTTKQNNRDAFEKRWEELTGIDLEIIQPDHDAYFDVLGQTFASGPENWPDAILL
AGSFYPGYAEEGALWDMTEAWNNSELKKSGRVTDESVIDNMKLDGKLYGFPVTRGNGCIT
YVKKAWLDRCGLKAPETYDEYLNMLKAFTEGDPDGNGVNGDTYGVSAAGFVGPEEPWTNY
LPEFYQDANPSFVKGEDGKWQDGFTQDNFKAALKRLRDAYAAGYIDKETLTNGTKDCRNK
FYEDKFGVFTYWAGTWATNLKKNLEANGRDGELVPLKPIKEVGKYIERTAPVWAITSSCE
NPEGVYKYFIESMLDGGDTQLLWSYGVEDVHWSKKAETILDNTYEEGVFHMRESLEHPGT
QYTKQHIDPMLSIANWENDPGRETVKAEAKESQTVFNENAKQAIIIPSTDVMATYNGDLT
TLKNSIVADVVVQGVSIEDAYARFEKEGGADWSKQIVDSLNELEAKK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagagttaaaaaaatgcttgcagccggaatggctgtaacgatggctgcgtctgtagcc
ttgagcggatgttcctcatcatcaggctcaaaaacaaccggggaggcaacaaacgctgaa
tcaggttctgctgctggaaaaacagcaagcggtgaagtgaagaaaccggaaaaaattacc
attatggtaaacggtacggtaacgacaaagcagaacaacagagatgcctttgaaaagaga
tgggaagaattgaccgggattgatttagaaatcatccagccagaccatgatgcatatttt
gatgttctgggacagacctttgcttccggtccggagaactggccggatgccattttgctt
gcaggaagcttttatcccggttatgcagaagaaggtgcgctttgggacatgacagaggct
tggaacaactcagagttgaagaaatccggccgcgtcaccgatgaaagcgttattgataat
atgaaacttgacggtaagctttacggatttcctgttaccagaggaaacggctgcatcact
tatgtaaagaaagcctggttagacagatgcgggctgaaggcaccggaaacttacgacgaa
tacttaaatatgttaaaagcatttaccgagggtgacccggatggtaatggtgtcaacgga
gatacatatggtgtttcagcagccggatttgttggaccggaggaaccatggaccaattat
cttcctgagttctaccaggatgccaatccttcctttgtaaaaggagaagacggaaaatgg
caggatggatttacacaggataattttaaagctgcccttaagagactgagagatgcttat
gccgcagggtatattgacaaggaaacgttgacaaacggaaccaaagactgccgcaataaa
ttttatgaagataaattcggcgtgtttacttactgggcgggaacatgggcaaccaactta
aagaaaaacctggaggccaatggcagagacggagagctggttccgttaaagcccatcaag
gaagtaggcaagtatattgaaagaactgcacctgtatgggcgatcacctcttcctgtgag
aatccggaaggcgtttataaatactttatcgaatccatgcttgacggaggagatacccag
ctgctgtggagctacggtgtggaggatgtccattggtctaaaaaggctgagaccattctt
gataacacctatgaagaaggcgtgttccacatgagagaaagtcttgagcatcctggaaca
cagtataccaaacagcacattgatccaatgttatccattgcaaattgggaaaatgatccc
ggaagagaaactgtaaaagcagaagcgaaagagtctcagactgtgttcaatgagaacgcc
aaacaggcgattattattccgtcaacggatgtaatggcaacttacaacggagatctaacg
accctcaagaactcaattgttgcagatgttgttgtacagggagtttctatagaagacgct
tatgcacgctttgaaaaagaaggcggagcagactggtccaagcagattgtagattctctc
aatgagcttgaagccaagaaataa
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