Lacrimispora sinapis: VIG27_03545
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Entry
VIG27_03545 CDS
T10884
Name
(GenBank) ABC transporter permease subunit
KO
K25674
polygalacturonan/rhamnogalacturonan transport system permease protein
Organism
lsia Lacrimispora sinapis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_03545
Transporters [BR:
lsia02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Polygalacturonan/rhamnogalacturonan transporter
VIG27_03545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
XIJ21942
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All DBs
Position
786095..787054
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AA seq
319 aa
AA seq
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MNIKRKGPAANAAGENKRPLLVSIRYYKGFYLMFLPVLIFAIVFHYLPMLGIRYAFFSYK
GIKEPVFVGLAHFEKMMNMPGFWSAFGNTITLSVIKLLLNTAMAVVLSLMLNEIRSLTFK
KAAQTIVYLPHFMSWVVTASVFTLILSPTNAGLINSILIKLGIVKEGIYFLGDQNWWRPM
FYTINVWKDTGWGTIIFIATLSGINPELYEAASMDGANRFNRLRYITLPALNNTIITVLI
LNLAKVMNLFESVFVMQNDAVIKKADVLQTYIYTQTFNSGALPDYGYTTAVGLTSSLVGC
FLVLLCNKASHKVRGRGIV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaagaggaaagggcctgcagcaaatgctgcaggcgaaaataaacggcctttg
ttagtttctatccggtactacaagggattctatctgatgtttttaccagtgctcattttt
gcaatcgtgtttcattatttgcccatgcttggaatccggtatgccttcttttcttacaag
ggcatcaaagagcctgtgtttgtaggtcttgcccactttgaaaaaatgatgaacatgccg
ggattttggagtgcatttggtaatacgattacgttaagtgtcattaagcttctgttgaat
acggcaatggctgttgtgctttctcttatgctcaatgagatacggtccttaacatttaaa
aaggcggcacagaccatcgtatatcttccccattttatgtcatgggttgtaacagcttcc
gtatttacactgattctttctcccaccaatgccggtcttatcaactctattttaataaaa
ctgggcattgtaaaagaagggatttatttcctgggtgaccagaactggtggcgtcccatg
ttctataccatcaatgtttggaaggatacgggctgggggaccatcatatttatcgcgact
ctatccggaatcaatccggagctttatgaagcggcgtccatggatggggcaaaccgcttt
aacaggcttcgttacatcaccctgcctgcactgaataataccatcattacagtccttatt
ttgaatcttgcaaaggttatgaatttatttgagtctgtattcgttatgcagaatgatgca
gtaattaagaaagcggatgtactgcagacttatatttacacacagacatttaattccggt
gctcttcctgattacggctatacgactgcagtcggtcttacttcctcgctggtaggctgt
ttccttgttcttctatgcaacaaagccagccataaggtcagaggaagaggaattgtgtag
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