Lacrimispora sinapis: VIG27_04320
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Entry
VIG27_04320 CDS
T10884
Name
(GenBank) polyamine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VIG27_04320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_04320
Transporters [BR:
lsia02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
VIG27_04320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
XIJ22094
LinkDB
All DBs
Position
939536..940591
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AA seq
351 aa
AA seq
DB search
MKKVLALSLCAAIALTGCGSAAPKGDKETTAAEKKLVLSTYGLSEDVSAEEVYKPFEDQF
GCKIVTETGSTNERYTKLSANAESTIDVIELSQAMTAKGIEEGLFEPLDLSKIENSQHLI
GAAKTMAEAGQGIAYTINSIGIMYDAEAVGFEIKSFDDLWKAELEGSIAIPDITTTFGPA
MVYMASDYKGVDVTSDNGKAAFEALEELKPNLVKTYAKSSDLINMFTSGEIKAAIVGDFG
VPTIKEANPNLTYVTPEVTYANFNTISITKNCKDKELAYAYINYRLSKELQTKTAKALNE
APTNNQVEIEESNAASMTYGPVAENAKVLDYSFVNPILSDWIDQWNRIINS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtattggcattatctttatgtgcggcgatcgcattaacaggttgcgggagc
gctgctcccaagggagacaaggaaaccacagcagcagaaaagaaactggtattatcgacg
tatggtttaagcgaagatgtttcagcagaagaagtgtacaagccatttgaagaccagttt
ggctgcaagatcgtgacagagacaggaagcaccaacgaacgttataccaagctttccgcc
aacgccgaaagcaccattgatgtcattgagctgtctcaggccatgactgccaaggggatc
gaagaaggactttttgagcctcttgatttaagtaaaattgaaaacagccagcatttaatc
ggtgcggcaaagaccatggctgaagctggccagggaatcgcttataccatcaatagcatt
ggtattatgtatgatgcagaagcagtcgggtttgagatcaagagctttgatgatctatgg
aaagcagaattagaaggaagcattgcaatccctgatatcacaaccacctttggccctgct
atggtttacatggcaagtgattacaagggtgttgacgtaacaagcgacaatggaaaagca
gcctttgaggcgctggaagaattaaaaccaaacctggtaaaaacctatgccaaatcttcc
gatttgatcaatatgtttacttccggagagatcaaagcagccattgtaggagatttcggc
gttcctaccatcaaggaagcaaatccaaatctgacctacgtaacaccagaagtaacttat
gcgaactttaacaccatcagcatcaccaaaaactgcaaggacaaagaactggcttatgcc
tatatcaattaccgcttgagcaaagaactgcagaccaagaccgcaaaagcattaaatgaa
gcaccgaccaacaaccaggtagagatagaagaatcaaatgctgccagcatgacctacggt
cctgtggcagagaatgccaaagtcctggattattcctttgtgaatccgattttgagcgac
tggatcgaccagtggaaccgtatcatcaacagctaa
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