Lacrimispora sinapis: VIG27_04505
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Entry
VIG27_04505 CDS
T10884
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lsia Lacrimispora sinapis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsia03016
]
VIG27_04505 (truB)
Enzymes [BR:
lsia01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VIG27_04505 (truB)
Transfer RNA biogenesis [BR:
lsia03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VIG27_04505 (truB)
Prokaryotic type
VIG27_04505 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
PqqD
DUF6210
Motif
Other DBs
NCBI-ProteinID:
XIJ22128
LinkDB
All DBs
Position
987729..988646
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AA seq
305 aa
AA seq
DB search
MADGIINVYKEKGFTSHDVVAKMRGILKQKKIGHTGTLDPMAEGVLPVCLGKATKLCDML
TDKTKTYEAVMLLGMETDTQDVTGKVLAEYPVEVDESQVKEAVLSFLGPYDQIPPMYSAL
KVDGKKLYELARAGKEVERKARPVEILEIRVDRIELPRVTMTVTCSKGTYIRTLCYDIGR
KLGCGGCMESLVRTRVSEFCLEESLTLSQIEALRDQGALAEHILAVDKVFGDYPALVMKP
DFDKLVHNGNPFYRNQALGEYTHEAGPVRVYDSSNQFIGVYEPGREEDLLKPQKVFLGGK
ERWSI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggcatcatcaatgtttataaggaaaaaggatttacctctcatgacgtcgta
gccaaaatgagaggtattttaaagcaaaaaaagataggacatacaggaactttggatccc
atggcagaaggggtgctcccggtgtgcctgggaaaggccacaaagctttgtgatatgctg
accgataaaaccaaaacgtatgaagcagttatgctgttgggcatggaaacggatacacag
gatgtcaccggcaaggtcctggcagaatatccggtcgaagttgacgagtcacaggtaaaa
gaagcggtacttagctttttggggccttatgatcagattccgcccatgtactctgcttta
aaggtagatggcaaaaagctctatgagctggccagagcaggaaaagaagtggaacgaaaa
gcaagaccggtggaaatattggaaattcgggtggaccggatagaacttcccagggttacg
atgacagtgacctgttccaagggaacctatatccggacactttgttatgatatcggaagg
aagctgggatgcggaggctgcatggaatcccttgtgcgcacccgggtttccgaattttgt
ttagaagaaagcctgactctttcccaaattgaagcacttagggatcaaggagcactggcg
gagcatatccttgccgtggacaaggtatttggtgattatccggctttggtcatgaagccg
gattttgataagctggtgcataacggaaaccctttttaccggaatcaggctttgggggaa
tacacccatgaggctggaccggtcagggtatatgacagcagcaaccagttcatcggggtc
tatgagccaggcagagaagaggacttactgaagccccaaaaggtatttctgggaggaaaa
gaaagatggagtatataa
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