Lacrimispora sinapis: VIG27_04610
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Entry
VIG27_04610 CDS
T10884
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lsia Lacrimispora sinapis
Pathway
lsia03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VIG27_04610 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsia03400
]
VIG27_04610 (uvrA)
DNA repair and recombination proteins [BR:
lsia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VIG27_04610 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VIG27_04610 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
nSTAND1
RsgA_GTPase
AAA_23
AAA_25
NACHT
cobW
DnaJ_CXXCXGXG
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
XIJ22149
LinkDB
All DBs
Position
1019337..1022162
Genome browser
AA seq
941 aa
AA seq
DB search
MAKQYIKIRGANEHNLKNVSVDIPRNELVVLTGLSGSGKSSLAFDTIYAEGQRRYMESLS
SYARQFLGQMEKPDVENIEGLSPAISIDQKSTNRNPRSTVGTVTEIYDYMRLLYARIGIP
HCPKCGREIRRQTVDQMVDQIMELPERTKIQLLAPVVRGRKGEHAKVLESSRKSGYVRVR
IDGNLYELSEEIKLDKNIKHNIEVVVDRLSIREGIEKRLTDSIETVMELADGLMVVDVID
GTPINFSQSFSCPDCGISIDEVEPRSFSFNNPFGACPDCFGLGYKMEFDEDLMIPDKSLS
IDEGAIVVMGWQSCTDKGSYTRAILEALSKEYNFRLDTPFEDYPKEVHDVLIYGTNGKEV
KVYYKGQRGEGIYDVAFEGLIQNVSRRYRETYSEASKAEYETFMRITPCPTCGGMRLKKE
SLAVTVGGKNIYEATNMSIVRSREFIDGLELTPMQHAIGDQILKEIRARISFLIDVGLDY
LTLSRSTSTLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLLKTLLHLRDL
GNSVLVVEHDEDTMMAADYIVDIGPGAGEHGGTVVAVGNAKQIMKNKKSVTGAYLSGRIK
IPVPRERRQPTGFLKVKGASENNLKNIDVEFPLGVMTCVTGVSGSGKSSLVNEILYKSLA
KKLNRARTVPGKHQSLEGVEQLDKIIAIDQSPIGRTPRSNPATYTGVFDLIRDLFASTPD
SKAKGYSKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCGGKRYNRETLDVKY
KGKSIYDVLNMTVEEAVKFFENVPSIARKISTLNEVGLSYVKLGQPSTELSGGEAQRIKL
ATELSKRGTGKTIYILDEPTTGLHFADVHKLIEILRKLSDGGNTVVVIEHNLEVIKTADY
IIDIGPEGGDKGGTVIAQGTPEEVAQCPGSYTGHYIKKYLE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagtatattaagataagaggtgccaacgagcacaacttaaagaacgtttcc
gtggatattccaaggaatgagctggttgttttaaccggcttgagcggatcgggaaaatct
tccctggcttttgatacgatttatgcagaagggcagaggcggtatatggaatctctgtcc
tcttatgcccggcagttcttaggacagatggaaaagccggatgtggagaacattgaaggg
ctttccccggctatttccattgaccagaagtccaccaaccgcaatccccgttctaccgta
ggaacggttaccgagatttatgactatatgagacttctctatgccagaatcggaattccc
cactgtcccaagtgcggcagggagatccgcaggcagaccgtagaccagatggtggatcag
attatggaactgccggagagaaccaagatccagcttcttgcccctgtggtaagaggaaga
aaaggcgagcatgcaaaggtattggaaagttccagaaaaagcggttatgtaagagtacgc
attgatggaaatctttatgagctttccgaagaaatcaaactggataagaatatcaagcac
aacattgaagtggtcgtggaccgtttgtccatacgggaaggaatagagaaacgtttgacg
gattctattgagacggtgatggaactggcggacggattgatggtggttgacgtaattgac
ggaacccccattaatttcagccagagcttttcctgcccggactgcggcatcagcattgat
gaggtggagccaagaagcttctcgttcaacaatccgtttggagcctgcccggattgcttc
ggacttggctacaagatggaatttgatgaagatctgatgatcccggataagagtctgagc
attgatgaaggggccattgtagtaatggggtggcagtcctgtacggacaaaggaagctat
accagggccatcctggaagctctttctaaggaatataatttccgtttggacactcctttt
gaagactatcccaaggaagtccatgatgttctcatctatggaaccaacggaaaagaagtt
aaggtttattataagggacagcgtggagagggaatttatgatgtggcatttgaagggctg
atccagaatgtgtccagaagataccgggagacgtattccgaggcttccaaggcggagtat
gaaacctttatgcgcatcactccatgccctacctgcggcggcatgagactgaaaaaggag
tctctggcagttacggttggcggtaagaatatttacgaggccaccaatatgtccattgtc
cgttcccgtgaatttattgacggactggagcttacccctatgcaacatgccattggtgac
cagatccttaaagagatccgggccaggatttcattcctgattgatgtaggacttgactat
ctgaccttgagccgttccaccagtactctttccggaggagaggcccagagaatccgtctg
gcgacccagatcgggtccggccttgtaggggttgcttatattttggacgagccgagtatc
ggccttcaccagagagacaatgataagctgctaaagacccttttgcatctccgtgacctt
ggcaacagcgtacttgtggtagaacatgatgaagataccatgatggccgctgattacatc
gtggatatcggtcctggagccggagaacacggcggtacggtagtggcagttgggaatgca
aagcagatcatgaagaataagaaatccgtaacaggagcttatttaagcggacgcattaaa
atcccggtccccagggagcggagacagccgaccggctttttaaaggtcaaaggagcttcg
gagaacaacttaaagaacattgatgtagagttcccactaggcgtgatgacttgtgtaaca
ggtgtatccggttcgggaaagagttccctggtcaatgagattctttacaaatctttggcc
aagaagctgaaccgggcaagaaccgttcccggcaagcatcaatcgctggaaggcgttgaa
cagctggataagatcatagccatagaccagtcacccattgggcggaccccaagatccaac
ccggccacctataccggtgtatttgatctgatccgtgatctgtttgcctccaccccggat
tccaaagcaaagggatattccaagggacgtttcagttttaatgtaaaaggcggacgatgt
gaagcgtgcagcggtgacggtatcatcaagatcgagatgcattttcttcctgatgtctac
gttccctgtgaagtctgcggaggaaaacgctataaccgcgagacccttgatgtaaagtac
aaaggcaaaagtatctatgatgtattaaacatgaccgtggaagaagctgtgaaattcttt
gagaatgtaccttctattgcaaggaagatttccacgcttaacgaggtaggactttcctat
gtcaagctgggtcagccctccacagaactatcgggcggagaagcccagagaatcaagctg
gctacggaattaagcaaacgtggaacgggtaagacgatctatattctggacgaaccgacc
acagggcttcattttgcggatgtccacaagctgattgagattctgcggaagctgtctgac
ggcggcaatacggtggtagtcattgaacataatctggaagtaataaaaaccgccgattac
atcattgatattggtcctgaaggcggggacaaaggcggtaccgtaatcgcacagggcacg
ccggaagaggtggctcagtgtcctggttcctatacaggacattatataaaaaagtatttg
gagtaa
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