Lacrimispora sinapis: VIG27_04710
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Entry
VIG27_04710 CDS
T10884
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
lsia Lacrimispora sinapis
Pathway
lsia02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VIG27_04710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsia03021
]
VIG27_04710
Transcription machinery [BR:
lsia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VIG27_04710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_Tnp_ISL3
Med31
DUF764
Motif
Other DBs
NCBI-ProteinID:
XIJ22169
LinkDB
All DBs
Position
1034591..1035559
Genome browser
AA seq
322 aa
AA seq
DB search
MTNEQLVIRIKAGIDPAENMLTLYNQVKAFIHTIAWKHRSYEDVEDLEQEGYLALYDAID
GYDPEAGCKFLTYAEYWISQRIMRYIERNSSCLRLSFQSQARLRQYKRFYDSFMKEHGRE
PSEEETAAQMGLSIDQVRDIHRNACIANLGSLDAPVKGYEEEGLTLGDGVPSGEDMEGDL
LDRMQHEQLKAVLWECVDSLPGRQPEVIRKQYQDNMTMTEIGKEYGVSCEAIRQDQAKAL
RELRKPKRSDRLRPFLPEEDRIYSMGLSGNGVGRFNRTWTSSTERAVIAREELAERMEEH
KRWLEELRRSQQARRAEKSAMM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgagcaacttgtaatcaggattaaagccgggattgatccggcagagaatatg
cttaccctgtacaatcaggtgaaagcctttattcatacaatagcctggaagcaccggagc
tatgaagatgtggaggacttggagcaggagggatatcttgccctatatgatgccatagac
ggctatgatccagaagccggctgcaagttccttacttatgcagaatattggatcagtcag
cggatcatgcgatacatagagcgaaactcatcttgtctacgcctttccttccagagccag
gcacgtttaaggcaatataagcggttctatgattcctttatgaaagagcatggccgggaa
ccgtcagaagaggagacagccgctcaaatgggcttaagtatagatcaggttagggatatc
catagaaacgcctgtatagcaaacctgggaagcctggacgctcctgtgaagggatatgaa
gaggaagggcttaccttgggtgatggtgttccttctggtgaggacatggaaggggatttg
cttgatcggatgcagcatgagcagcttaaggcggtgttatgggaatgtgtggacagttta
ccggggcggcagccggaagtgatacgcaagcagtaccaggataatatgaccatgacagag
ataggaaaagaatatggtgtttcctgtgaagctatccggcaggatcaggctaaggcactc
cgggagctgcggaagcctaagaggtcagatcggttaagaccattcttgccagaagaggac
cgtatttacagtatggggctttcggggaatggtgtggggcggtttaataggacatggacc
agttctacagagagggcggtcatagcaagggaagaactggcagagcgcatggaagaacat
aaacggtggcttgaagagttgcgacggtcgcaacaggccaggagagctgaaaagtcggct
atgatgtag
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integrated database retrieval system
