Lacrimispora sinapis: VIG27_04800
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Entry
VIG27_04800 CDS
T10884
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
lsia Lacrimispora sinapis
Pathway
lsia03430
Mismatch repair
Brite
DNA repair and recombination proteins [BR:
lsia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VIG27_04800
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NCBI-ProteinID:
XIJ22186
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Position
1053891..1055834
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AA seq
647 aa
AA seq
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MDQTFHTLEFHRILEKLENLSHTEAAKEQIRNLTPSLKESQVQKDLRDTTEARTILDQMG
LPPAVGMKDLSDIITTAKQGGCLTAEELEQTGIMLTGVKRYKEFLNRCKHLELSLPYYEL
ELDPLDELSRAIYESIRNGRVEDFASRGLKNVRQEIGRLEEKLRTKAENLLRANKKYFSD
SFVTIRNGRICLPVKKDYKSSVPGSVIDQSSTGSTLFIEPAVIAALNGELELLRIEEENE
VRRILYTLTAEVEENLPVLEKNKHFLEKLDFLFAKGRLSEEMNAIEPSIHTDRIIQITNG
RHPFMNPETVVPLNFEMGKKERGIVITGPNTGGKTVSIKTVGLFSLMAQCGLHVPCEKAD
LCMNSQVLCDIGDGQNITENLSTFSAHITNVLKILEEAGKESLVIMDELGSGTDPAEGMG
IAIAILDELRHKGCLFLATTHYPEVKTYAKETEGITNARMAFDKETLKPLYRMEIGEAGE
SCALAIARRLGMTEDMIEKARNYAYGEWESMNHPIHDSKPGEKQFQSSKGPRIEKEKKTA
KSNTAMKELFAIGDSVMIYPDNKKGIVCRPVNEQGVMQVQMPDKKIWINHKRVKRLVAAS
QMYPENYDFSIIFDTVENRKARHKMEKGYQEGLEIRTEEIQTFHKKQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacatttcatacattagaatttcatcggatattagaaaaattagagaaccta
tctcatacggaagcggcaaaagaacaaatcaggaatttaacacccagcttaaaggaaagc
caggtgcaaaaggatctccgggacaccacggaagcacgaacgattctggaccaaatgggg
ctgcctcccgcagtaggaatgaaagatctttctgacattataaccactgcaaaacagggc
ggctgcctcactgcagaggaactggaacagacagggattatgcttacgggagtcaaacgc
tataaggagtttttgaaccgttgcaagcatctggaattaagtctgccttattatgaactg
gagctggatccccttgatgagctttccagagccatttatgaaagtatcagaaacggaaga
gtagaggattttgcaagcaggggtttgaagaatgtccgtcaggaaataggcagattggaa
gaaaagcttcggacgaaagcagagaatcttttaagagcaaataaaaagtatttttcagat
tcctttgttaccataagaaacggcagaatctgccttccggtaaaaaaagattataagtca
tctgttccgggcagcgtgatcgatcagtcttcgactggttccaccctgtttatcgaaccg
gccgtcattgcagcattgaacggagaactggagctgttacggatcgaagaggaaaatgaa
gtaagaaggattctttataccctgaccgcagaggtggaagagaatcttccggtgttggaa
aagaataaacactttttagaaaagcttgattttctgtttgcaaagggacggctgagtgaa
gaaatgaatgccatagaaccgtcaattcatacggatcggatcatacagatcacaaatgga
cgccatccctttatgaatccggaaacagtggtgcccctcaactttgaaatggggaaaaaa
gaacgtggcatcgtgatcacagggccgaacacaggaggtaagaccgtttccattaagacc
gtaggattattttcccttatggctcaatgcggacttcacgtgccctgtgaaaaagcggat
ctgtgtatgaacagtcaggtgctttgtgatataggagacggtcagaacattacagaaaat
ttgtccactttttctgctcatatcaccaatgtgcttaagattttagaagaagccggaaaa
gagagcctggtcatcatggatgaactgggttccggtacggacccggcggaaggtatggga
attgccattgccattttagatgaactgcggcacaaagggtgcttattcctggctactacc
cattatccggaagtaaagacctatgcaaaagaaacagaaggcatcaccaatgcacggatg
gcttttgataaggaaaccttaaaacctctctatcgtatggaaatcggggaagcgggagaa
agctgtgctcttgccatcgcaagaaggcttggaatgactgaggatatgatagaaaaggcc
agaaattatgcctatggagaatgggaaagcatgaaccacccaatccatgattccaaacca
ggagaaaaacaattccagtcatcaaaaggcccaaggatagagaaagagaaaaagacagca
aagagtaatactgctatgaaagaattattcgccataggtgacagtgtgatgatttatccg
gacaacaaaaaaggcatcgtttgcagaccggtcaatgaacagggagttatgcaggtccag
atgccggataaaaaaatatggatcaaccataagcgggtgaaacggctggttgccgcttca
cagatgtatccggaaaattatgacttttccattatttttgatactgtggaaaaccgaaag
gcgagacacaagatggaaaaaggatatcaggaaggcctggaaatcagaacagaggaaata
cagaccttccataaaaaacagtaa
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