Lacrimispora sinapis: VIG27_04940
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Entry
VIG27_04940 CDS
T10884
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10192
oligogalacturonide transport system substrate-binding protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIG27_04940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_04940
Transporters [BR:
lsia02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Oligogalacturonide transporter
VIG27_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
New_glue
Motif
Other DBs
NCBI-ProteinID:
XIJ22214
LinkDB
All DBs
Position
1082817..1084193
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AA seq
458 aa
AA seq
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MRKIKQWTAMGLATVMAMSLSACGSSKSSTTDSSSAAETTKAAEATSAASGTTSGEPVEL
KFSWWGGDSRHAATEEAIKAFEAKYPNIKVTPEYGAWTGWEEKQSLNILGGNASDVMQIN
WNWIESYSQGGKSFANLEDYSDVLDLTQFSPESLDLCKVDNKLMAVPISLTGRLFYWNKT
AFDEVGVPIPTDLDSLYAAGEAFKAKDPDMYPLALGQYDRMILMVYYLESKYGKNWVEGG
QINYTEEEVKDGMDFINELEAKHVIPKQATIDGDMADSLDKNAKWIDGKYAGIFEWDSSA
SKFKKALEGSVNKPGQEFVVGDFVKMGDNDGGFTKISMAFAVSANSQHPKEAAMLINFLL
NEEEGVKICSTERGIPCSKAGLKILEDNKLGDALTIEANTKVMNYSKFTLDSKFEHNDLK
ANPDGVYYKVFGKLSSGELDSQAAAKELIKGITDTLES
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatcaaacagtggacagcgatggggttagcgactgttatggctatgtcttta
tctgcctgtggaagcagtaaaagcagtactacggattctagcagtgcggctgaaaccaca
aaggcagcagaggcaacttcggcagcttcaggaacaacgtccggagagccggtggaactc
aagttttcctggtggggtggggattccagacatgcagcaacagaagaggcaatcaaagca
tttgaggcaaaatatccgaatataaaagtaactcccgagtacggtgcatggacaggctgg
gaagaaaagcagtccttaaatatcctggggggcaacgcctctgatgtgatgcagattaac
tggaactggattgaatcctatagtcagggcggaaaatcatttgctaatctggaagattac
tccgacgttcttgatttgacacagttctcaccggagagtcttgatttatgcaaagtggat
aataaattaatggctgttccgatttccttaacaggacgtttattctactggaacaagacc
gcttttgatgaggttggagtaccaattcctaccgatcttgattctctgtatgcagctggg
gaagcatttaaggcaaaggatcctgatatgtatccgctggcactgggacagtatgaccgt
atgatcttaatggtatattatctggaatctaaatatggcaagaactgggtagagggagga
cagatcaactataccgaagaggaagtaaaagacggtatggatttcatcaacgagcttgaa
gcaaagcatgtcattccgaaacaggcaaccattgatggagatatggccgactctcttgac
aagaatgcaaaatggattgacggaaagtatgcaggtatctttgagtgggactcctctgct
tctaaattcaaaaaagctcttgaaggcagtgtcaataagccgggtcaggaatttgttgtt
ggtgactttgttaaaatgggagacaacgacggaggctttacaaagatctccatggcattt
gctgtatcagcaaactcacagcatccaaaggaagctgctatgttaatcaatttcctttta
aatgaagaggaaggtgtgaagatctgttcaacagaaagaggaattccttgctctaaagca
ggcttaaagattcttgaagataataaacttggcgatgccctgaccattgaagcaaacaca
aaggttatgaactacagcaagtttactttggacagcaagtttgagcacaatgatttaaag
gcaaacccggacggcgtttactacaaggtatttggtaaattaagctcaggagaacttgat
tcccaggcggctgcaaaagagctgattaagggcattactgatacactggaaagctaa
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