Lacrimispora sinapis: VIG27_05230
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Entry
VIG27_05230 CDS
T10884
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia00220
Arginine biosynthesis
lsia00240
Pyrimidine metabolism
lsia00250
Alanine, aspartate and glutamate metabolism
lsia01100
Metabolic pathways
lsia01110
Biosynthesis of secondary metabolites
lsia01240
Biosynthesis of cofactors
Module
lsia_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VIG27_05230 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VIG27_05230 (carB)
00220 Arginine biosynthesis
VIG27_05230 (carB)
Enzymes [BR:
lsia01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
VIG27_05230 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
XIJ22265
LinkDB
All DBs
Position
1148353..1151556
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AA seq
1067 aa
AA seq
DB search
MPKIQDIKKVLVLGSGPIIIGQAAEFDYAGTQACRSLKEEGVEVVLLNSNPATIMTDKDI
ADKVYIEPLTVEVVEQLILKEKPDSVLPTLGGQAGLNLAMELADNGFLEKHNVRLIGTTA
LTIKKAEDREMFKETMEKIGEPVAPSDIVENVEDGLRIAEEIGYPIVLRPAYTLGGSGGG
IAENPAQCREILENGLRLSRVGQVLVERCIAGWKEIEYEVMRDGAGNVITVCNMENIDPV
GVHTGDSIVVAPSQTLGDKEYQMLRTSALKIISELGITGGCNVQYALHPESFEYCVIEVN
PRVSRSSALASKATGYPIAKVAAKIALGYTLDEIKNAVTKKTYASFEPMLDYCVVKMPRL
PFDKFLSAKRTLGTQMKATGEVMSICTSFEGGLMKAIRSLEQHVDSLLSYDFTELTDEEL
TETLHLVDDRRIWVIAEAIRRGFSYETIHEITKVDVWFIDKLAILVEMEEALKKGPLTTE
LLKEAKRLEFPDTVISRLTGISVEDIHQTRKDNGITAAFKMVDTCAAEFAAETPYYYSCF
GSENEAIQTSGRKKVLVLGSGPIRIGQGIEFDFCSVHSTWSFSREGYETIIVNNNPETVS
TDFDIADKLYFEPLTPEDVESIVDIEKPDGAVVQFGGQTAIKLTEALMKMGVPILGTAAE
DVDAAEDRELFDKILEECQIPRPAGQTVFTAEEAKTVANQLGYPVLVRPSYVLGGQGMQI
AISDQDVDEFIGIINQIAQEHPILVDKYIMGKEIEVDAVCDGQEILIPGIMEHIERAGVH
SGDSISVYPAQSIDEEVKGKLVEYTRRLARALHVKGMINIQFIVSGKDVYVIEVNPRSSR
TVPYISKVTGIPIVPLATQVICGHTIKELGYEPGLQPEADYIAVKMPVFSFEKIRGADIN
LGPEMKSTGECLGIAKTFNEALYKAFAGAGIKLPRHKNMIITVKDSDKEEIIEIARRFQA
QGYKIFSTSGTAKVLNENGVKALMVRKLEQESPNLLDLILGHEIDLVIDTPPQGADRSKD
GFTIRRNAIETGVTVLTSLDTAAALVTSMENRAKELTLIDIAQVKNI
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagattcaggatattaagaaagtgctcgttcttggctccggcccgatcatcatc
ggccaggctgcagaattcgattatgccgggacccaggcatgccgttccttaaaagaggaa
ggcgtagaggttgttttattaaattccaatcctgccaccatcatgacggataaggatatt
gcagataaagtatacatcgagcctttgacggtcgaggtggtggagcagcttattttaaaa
gaaaaaccggacagcgtgcttccgaccctgggcggccaggcaggattaaatcttgccatg
gagcttgctgacaacggctttttggaaaagcacaacgtccgcctcatcggaaccacggct
ctcaccattaaaaaggcagaagaccgtgagatgtttaaggaaaccatggaaaagatcggg
gaaccggtagctccttccgatattgtggagaatgtggaagacggacttcggatcgcggaa
gaaatcggatatcccatcgttcttcgtcctgcttataccctgggaggttcgggcggcggg
attgctgagaatccggcccagtgccgtgagattcttgaaaacggacttcgcttatcccgt
gtgggacaggttctggtagaacgctgtatcgccggatggaaggaaattgaatatgaagtt
atgcgggacggtgcaggaaatgtgatcaccgtatgtaatatggaaaacatcgaccccgta
ggcgttcataccggagacagcatcgtagtggcaccgtcccagacccttggagacaaagag
taccagatgctgcgtacctccgcattaaagatcatcagcgagctggggatcacaggcggc
tgtaacgtacagtacgcccttcacccggaaagctttgagtactgcgtgatcgaggtaaac
ccacgtgtaagccgttcctctgcgctagcatcaaaggctaccggatatcccattgcaaag
gtggcggcaaagattgccttaggatataccctggatgagatcaagaatgcggtaacgaaa
aaaacctatgcaagttttgaacccatgcttgattactgtgtggttaagatgccccgcctt
ccgtttgataagtttttaagtgccaagagaactctggggacccaaatgaaggcaacgggt
gaggtcatgagcatctgcaccagctttgaaggcggccttatgaaagccatccgctctctg
gagcagcatgtggacagcctgctgtcttatgactttacggaacttacggatgaagaactg
acagaaacccttcatctggtggatgacagaagaatctgggtcattgcagaggcgatcaga
agaggcttttcctatgagaccattcatgagatcacaaaggtcgatgtgtggtttattgat
aagctggccattcttgtggagatggaagaagcactgaaaaaaggtcctctgaccaccgaa
ttattaaaggaagccaaacgtctggaattcccggatactgtgatttccaggctgactgga
atctctgtggaagacattcatcagacaagaaaagacaacggcattacagcggcatttaag
atggtagatacctgtgcggctgaatttgccgccgaaacaccttattattactcctgcttt
ggaagtgagaatgaagccattcagacttccggaagaaagaaagtattggttctgggttcc
ggtcctatccgcatcggccagggaatcgagtttgacttctgctccgttcacagcacctgg
agcttcagcagagaaggctatgagacgattattgtcaataacaaccctgagaccgtaagt
acagactttgatattgccgataaactgtattttgaacctcttactccggaggatgtggag
agcattgtggacatcgaaaagccggacggagcagtggtacagttcggcggacagactgcc
atcaaactgaccgaagcgctgatgaagatgggagtccccattcttggaaccgcagcagaa
gatgtagatgcagcggaagaccgggagctttttgataagatcctggaagaatgccagatc
ccaagaccagccggacagactgtatttacagccgaagaagcgaagacggtggcaaaccag
cttggttatccggtgttagtaagaccttcctatgtacttggcggacagggaatgcagatt
gcgatttccgatcaggatgtggacgaattcatcggaatcatcaatcagattgcccaggaa
cacccgattctggtggataaatatattatgggaaaagagatcgaagtcgatgcagtctgc
gacggccaggagatcttaatccctggcattatggagcatatcgaacgtgccggtgtccat
tccggtgacagtatttccgtatatccggctcagagcattgacgaggaagtcaagggaaag
ctggtggaatacaccagaagactggcgagggctcttcatgtaaagggtatgatcaatatt
cagttcattgtgagcggaaaagacgtatatgttatcgaggtaaatcctcgttcttcccgt
acggtgccatatatcagtaaagtgaccggaattcctattgttcctctggcgacccaggtg
atctgcggccataccattaaggagctggggtatgagccggggctgcagccggaggcagat
tacattgccgtaaagatgccggtattctcctttgagaagatccgcggcgcagacatcaat
ctgggaccggagatgaaatccacgggagagtgtcttggaattgccaagacctttaacgag
gcactttataaggcgtttgcaggagcaggcattaagctgcccaggcataagaatatgatt
atcaccgtaaaagattccgacaaggaagagatcattgaaattgcaagaaggttccaggca
cagggctataagatattctccacctccggaactgcgaaggtattaaatgaaaacggtgta
aaagcccttatggtgcggaagctggaacaggaatcgcccaatctgctggacttgattctg
gggcatgaaattgatctggtcattgataccccgcctcagggggccgacagaagcaaagac
gggtttacgatccgcagaaatgccattgaaaccggcgtgactgttcttacttccctggat
acggcagcagccctggtgaccagtatggaaaaccgggccaaagaattgaccctcatcgac
attgcacaggttaaaaatatataa
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