Lacrimispora sinapis: VIG27_05340
Help
Entry
VIG27_05340 CDS
T10884
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia00550
Peptidoglycan biosynthesis
lsia01100
Metabolic pathways
lsia01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VIG27_05340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VIG27_05340
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsia01003
]
VIG27_05340
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lsia01011
]
VIG27_05340
Enzymes [BR:
lsia01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
VIG27_05340
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VIG27_05340
Glycosyltransferases [BR:
lsia01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
VIG27_05340
Peptidoglycan biosynthesis and degradation proteins [BR:
lsia01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
VIG27_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
XIJ22283
LinkDB
All DBs
Position
1165075..1167621
Genome browser
AA seq
848 aa
AA seq
DB search
MEKRKKKKKSMWSVFFKPIKIILFVFLAVMVLGCLAGGAVFLKYQDEILACKEKADSIMS
KTSKTDFSQPTDTRIFDSSGNLIGTINSGHYEYVPISEISENLQKAYVAQEDRRFYKHHG
IDYQGLLRAGLVYIKNKGTITQGGSTITQQVIKNTYLTQERTFQRKLTEFFAAPQMEKKY
TKSEILEFYCNTNFYANRCYGVSEASRYYFDKDAKDLTIWEAATLAGISNNPSKYDPVAH
PETSQKKRDQIINNMAKNKMITEEERDYALAQPLTVAKIYEPGTKENYQTSYAIHAATLE
LMKNDGFVFKYVFANKAAYDAYKEQYQEIYQSKSDMIRNGGFEIHTSLDSDIQNSLQSTI
DERLKGFKDVQKNGKFALQGAAVCIDNRTGYVVAIVGGRGTDDEYNRGFLSKRQPGSTIK
PLIDYAPAFETGFYYPSRLMNDHLFDKGPKNSGGKYYGAVSVREALNRSLNTVAWQVLAD
IGVDKGIGYLGKMHFTGLSYMDNGNFSMSIGGFTEGARVIDMAKGYSVLANKGMYSNRSC
ITSIKSQYDGEIYNESQADERIFTEDTAYMITDVLKGTLEKPYGTGYGLGLSVPAAGKTG
TTNSSKDTWFCGYTKYYTTAIWVGYDTPKAMPGVYGKTYSGRIWHDFMKNINKDLPPLDW
DMPSTVYLSNVDSRGEKTTSETGVKDLFSSVAEAAAKADAVKWREEEERKKLESQSQKNL
EDSVAAQQAVEQAAASLQSLIGELNGLKYRDSTTAEKVNTAQSLLAQLNGTQYYDSLKPQ
LDEAVSYVSSLPEKEDSTKPQEIGPGMTKPSETAPAVFPGDIDSGVGAEPGFSPGDFEDG
VQSAGPGM
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacgaaaaaagaagaagaaaagtatgtggtctgtattttttaagcccataaaa
atcattcttttcgtgtttctggcggttatggttttagggtgcctggccggcggtgccgta
tttttaaaatatcaggatgagatcctggcctgtaaagaaaaggccgattccattatgagt
aagacaagcaagaccgacttttcccagcctacggatacgagaatctttgattcttccggg
aatttaatcggaaccatcaattccggccattatgagtatgttcctatttcggagatcagt
gaaaatctccagaaagcttatgtggcacaggaggacagaagattctataagcaccatggc
attgattatcaaggcctgcttcgtgcaggtctggtatatattaagaacaaggggaccatt
acccagggcggcagtaccattacccagcaggtaattaagaatacctatctgacgcaggaa
cggacctttcagagaaagctgaccgaattttttgcggcccctcagatggagaaaaagtat
acaaagtcagagattttagaattttactgcaacaccaatttttatgccaaccgctgttac
ggcgtatcggaggccagccgctattatttcgacaaagatgccaaggatttaaccatatgg
gaagcggcgacactggccggcatcagcaacaatccttccaagtatgatccggtggcccat
cctgagacttctcagaaaaaaagagaccagatcatcaacaatatggcaaaaaacaagatg
atcacggaagaagaaagagattatgcattggcccagcccttaaccgttgcaaagatttat
gagcctggcacaaaagagaattaccagaccagttatgccattcatgcagccacgttagag
ctgatgaagaacgatggttttgtatttaaatatgtgtttgcaaacaaagctgcatatgat
gcatacaaagagcagtatcaggaaatttaccagtccaaaagtgatatgataaggaacggt
ggatttgaaatacatacaagccttgattccgacatacagaattctctgcagagcaccatt
gatgagcgtttgaaaggttttaaagacgttcagaaaaatggaaaattcgcattgcaggga
gccgctgtctgcattgataaccggaccggctacgtggtcgccatcgtaggaggccgggga
actgatgatgaatacaacagaggctttttgagcaaacgccagccaggttccaccattaag
ccattgattgactatgcgcccgcctttgaaactggattttattatccttccaggctgatg
aatgaccacttatttgataaaggacctaaaaacagcggaggaaagtattatggtgctgtt
tccgtcagagaggcattgaaccgaagcttaaatacggtggcatggcaggtgcttgcagat
atcggggtggataagggaatcggatatctggggaaaatgcattttaccggattgagctac
atggataacggcaatttcagtatgagcatcggaggttttacagaaggtgcccgtgtgatt
gacatggcaaaaggatattctgttttggctaataagggaatgtacagcaaccggtcctgc
atcaccagtattaaaagccagtatgacggagaaatctataatgaaagccaggccgatgaa
aggatctttaccgaagataccgcttatatgattacggatgtgttaaaaggaacgctggag
aaaccttacggtaccggttacggccttggcctttccgttccggctgcaggcaagaccggt
acgaccaacagcagtaaggatacctggttctgcgggtataccaagtattataccaccgcc
atttgggtaggatatgatacaccgaaggcaatgccaggggtatatggaaagacctattcg
ggaagaatctggcatgattttatgaagaacatcaataaagaccttccgcccttagactgg
gatatgccgtccacggtctatctgtccaatgtggattccagaggagagaagaccaccagt
gaaaccggagtcaaagatctgttttcttccgtggcagaggccgcggcaaaagccgatgcg
gtaaaatggagggaagaggaagaacggaaaaagctggaatcccagtcccagaaaaatctg
gaagattctgtggctgcacagcaggctgtggaacaggcagctgcctctctccagtcactg
attggagagcttaacggtctgaaataccgggacagcacgacagcggaaaaggtaaacacc
gctcagtccctgcttgcccagttgaacggaacccagtattatgacagtctgaaaccgcag
cttgatgaggcggtcagctatgtatcctcccttccggagaaagaggattccaccaagcct
caggagatcggtccgggaatgacaaagccttcggagactgcacctgcagtattccccggt
gatattgattcgggagtgggggcagagccgggctttagccccggagattttgaagatggt
gtccagtccgcaggacctggcatgtaa
DBGET
integrated database retrieval system
