Lacrimispora sinapis: VIG27_05550
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Entry
VIG27_05550 CDS
T10884
Name
(GenBank) sigma-70 domain-containing protein
KO
K03086
RNA polymerase primary sigma factor
Organism
lsia Lacrimispora sinapis
Pathway
lsia02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VIG27_05550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsia03021
]
VIG27_05550
Transcription machinery [BR:
lsia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VIG27_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Robl_LC7
Motif
Other DBs
NCBI-ProteinID:
XIJ22321
LinkDB
All DBs
Position
1214374..1214973
Genome browser
AA seq
199 aa
AA seq
DB search
MHDDFYQMYLEEMGDIVPCTEEETVQLLKAVKEGREEAKKRLVEGNLKTALSVAKEFEGR
GVFLTDLVQEANMALIMAVDQYNGGEDKAEFDRYSGDRMKEALLAAVEEEASVEQTGEEL
AARVNVLQQISQGMAEELGREATVEELAHKMKMTVGEIRGIMKMAMDAVSLNAENMDLEA
LADVEGIGLITEEEPDYEG
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgatttttatcagatgtatttagaagaaatgggagatatcgttccctgtacg
gaagaagaaacggtacagcttttaaaggcggtaaaagaaggccgggaggaagcaaaaaaa
cgtcttgttgaaggcaatctgaagaccgcactttccgttgcaaaggaatttgaaggaagg
ggcgtctttcttacggatctggtgcaggaagccaatatggctttgatcatggcggtggac
cagtataacggcggggaggataaagcggaatttgaccgttattcaggtgaccggatgaag
gaggctcttcttgcagcggtggaagaagaagcatctgtggagcagaccggagaagagctg
gctgcaagagtgaatgtgctccagcagatttcacagggaatggccgaggaactggggcgg
gaagccaccgtggaggaactggctcataaaatgaaaatgaccgtgggtgaaatacgggga
atcatgaaaatggcaatggacgcggtgagtctgaatgcggaaaatatggatctggaagca
cttgctgatgtagaaggaatcgggctgatcacagaggaagaaccggattacgaaggataa
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