Lacrimispora sinapis: VIG27_05610
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Entry
VIG27_05610 CDS
T10884
Name
(GenBank) collagen-like protein
Organism
lsia Lacrimispora sinapis
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
BclA_C
DUF8789
Motif
Other DBs
NCBI-ProteinID:
XIJ22333
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Position
1231487..1232959
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AA seq
490 aa
AA seq
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MPNSALQIELNTATSVASNANVPFDTIVYSAGGISYNPATGVITFLEAGRFVIDWWLATQ
SSQSTNGASFALSSSQGDFLEGNSPIKTGEVYGIGIVDVTTAPVTLSLVNISNAPIFFAT
QVPLKGTLVIVEDDQDSAGGTGPTGATGPTGPTGPAGATGATGPAGATGPVGPTGATGPT
GPTGDTGATGPTGDTGATGPTGDTGVTGPTGAAGLTGPTGDTGPTGPTGAAGLTGPTGDT
GATGPTGDTGATGPTGAAGLTGPTGDTGPTGPTGAAGLTGPTGDTGPIGPTGATGPTGAA
GLTGPTGDTGPTGPTGAAGLTGPTGDTGPTGPTGDTGPTGPTGDTGPTGPAGLAAFGGRF
SDDPQTLILALGIESQVDLTNTMPSNDVTYQPAESITIVNPGTYEVSFLLRGSVSVGALT
TVAVRLNGADIPSLTNTQGLTLGISSEFTGNAILTLAANDVLDLAVSAALGLTLSLPAGT
NATLVVKKLD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatagtgcgcttcagattgaactgaatacagcgacaagtgttgcatcaaatgcc
aacgttccttttgataccattgtctattccgctggtggtatatcttacaacccggcaact
ggtgtaattacttttctggaagcggggagattcgtaattgattggtggcttgcaacacag
tcttctcaatcaacaaatggtgcatcttttgcactgtcttcttcacagggagattttctg
gaaggaaattctccgattaaaactggggaggtatatggaattggaatcgtagatgtaact
acagctccagttaccttgtcccttgttaatatcagtaatgcaccgatatttttcgcaact
caagttcctttaaaagggacgctggtcattgttgaggatgatcaggattctgccggtgga
accggcccaacgggagcaacaggcccaaccggtcccaccggccccgcaggagcaacaggt
gcgaccggtccggcgggagccacaggacctgtgggtccaacaggagccaccggcccaacc
ggtccgacaggagatacgggagccaccggcccgacgggagatacgggagcaaccggcccg
acgggagatacgggagtcaccggcccgacaggagccgcaggactaaccggcccgacggga
gatacgggcccaactggcccgacgggagccgcaggactaaccggtccgacgggagatacg
ggagccaccggcccgacaggagatacgggagcaaccggtccaacaggagccgcaggacta
accggtccgacaggagatacgggtccaactggtccaacaggagccgcaggactaaccggc
ccaacgggagatacgggcccaatcggtccaacgggagccaccggcccaacgggagccgca
ggactaaccggtccgacgggagatactggcccaaccggcccgacgggagccgcaggacta
accggtccgacgggagatacgggaccaaccggtccgacaggagatacggggccaaccggt
ccgacaggagatacaggaccaaccggccctgcaggtctggcggcttttggcggccgcttt
agcgatgatccacagaccttaatacttgcgcttggaattgaatcacaggttgatttgaca
aataccatgccgtcgaatgatgttacgtatcaaccggctgaaagtattacaattgtcaac
ccaggaacgtatgaagttagtttcctgcttcgggggtcagtatcagttggtgctcttaca
accgttgcggtacgtctgaacggagccgatattccaagtcttaccaatacgcaggggttg
actcttggtatcagctcggagtttactggaaatgccatattaactcttgctgctaacgat
gtattggatttggctgtttcggctgcacttggattgaccttgtcgcttccagctggtaca
aatgctactctggtggtcaaaaaactagattaa
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