Lacrimispora sinapis: VIG27_06735
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Entry
VIG27_06735 CDS
T10884
Name
(GenBank) HAMP domain-containing methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02020
Two-component system
lsia02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VIG27_06735
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VIG27_06735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lsia02035
]
VIG27_06735
Bacterial motility proteins [BR:
lsia02035
]
Flagellar system
Chemotaxis proteins
MCPs
VIG27_06735
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
TarH
COG6_N
Motif
Other DBs
NCBI-ProteinID:
XIJ22545
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Position
1487450..1489264
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AA seq
604 aa
AA seq
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MKNLKIGKRITIAFGIVFVLFLIVSCTSLYGLVTNNGKFVEFYNNGHQVSLLAVEMRRDI
QSSAKNVSYATMSLDVNTTASYIEEAEADFDKLEEGIKYLKENFRGDQALVDDMTKTLKE
AEPFKEQIFVLAKENKSRQASNLFFDSLEPYYLKVQDDLMKISDSAKANAESDFKHAQSV
IKVTEVVIVIFQLLGAAATIGLASMITKSIVKPVKEIERAAGEMSKGSLHVDLSYQSNDE
LGVLADGMRTTISNIGNIIDDITYLLGAMASGDFQVGSKCREKYVNDYQPIMEAIRNIRN
NLSDALSRINEAADQVANGSEQVSSGAQALSQGATEQASSIQELAATINDISNQINSNAE
NAKEARLEAEEATKNVAVSNEKMSEMNQAMLQISDKSNEIGKIIKAIEDIAFQTNILALN
AAVEAARAGEAGKGFAVVADEVRNLASKSGEAAKNTTLLIEESIHAVENGTKITAETSKS
MQAVVESTKRINAIIEDVAEASDKQAVAVTQVTQGIEQISSVVQTNSATAEQSAAASEEL
SGQAQIMKGLVQKFKLYDGEAAGEFHSETIQPELPHYEEEPEAPAVSIDPVYFEDSDSYD
NGKY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctaaagattggtaaaaggattacaattgcttttggaattgtattcgttttg
tttttaatcgtttcctgtacttctttatatggcttagttacgaataatggcaagtttgtt
gagttttataacaacggccatcaggtttctttgctcgctgtggaaatgagacgtgatatt
cagtcttctgcgaaaaacgtaagctatgcgacgatgagtctggatgtgaatacgacggcc
tcctatattgaagaagcagaagctgatttcgataagttggaagaaggaatcaagtatttg
aaagagaatttcagaggggatcaggctcttgtagacgatatgaccaaaactttgaaggaa
gcagaaccttttaaagagcagatatttgttcttgcaaaagagaacaagagccgtcaggca
tccaatcttttctttgattcactggaaccatattatttaaaggttcaggatgatttaatg
aaaatcagtgattctgcgaaagcaaatgccgagagtgactttaagcacgcacagtccgtt
ataaaagtcactgaggttgttattgttatatttcagctccttggagccgcagctaccatc
ggattggcttccatgataacaaaaagtattgtaaagcctgtaaaagagatcgaaagagct
gccggggagatgtccaagggaagtcttcatgtagatttaagctatcagtccaacgatgaa
ctgggagttcttgcagatggcatgaggaccaccatttccaatatcggtaacattattgat
gatattacttatcttttgggggctatggcatcgggagatttccaagtcggttccaaatgc
cgggagaagtatgtcaatgattatcagcctattatggaggcaatacgcaatatccggaat
aacttgagcgacgcactttcccgcatcaacgaagcagccgaccaggtagccaatggctcc
gagcaggtttcctccggtgcacaggctctttcccagggggctacggagcaggcatcctcc
attcaggaacttgcagctaccattaatgatatttccaaccaaatcaacagcaacgctgag
aatgcaaaagaggcccgcctggaagcagaggaagcaacaaagaatgtggctgtaagtaac
gaaaagatgtctgagatgaaccaggctatgctgcagatcagtgacaaatccaatgaaatc
ggtaaaatcattaaggccattgaagatattgctttccagacgaatatcctggcacttaat
gcagcagtagaagcagcccgtgcaggagaagcaggaaagggctttgcagttgttgctgat
gaagtccgcaatcttgccagcaaatccggtgaggcagcgaaaaatacgacccttctgatt
gaagaaagcatacatgcggtggaaaatggaaccaagatcacggcagaaacctctaagtcc
atgcaggcagtcgtggaaagtacaaaacggatcaatgcaattattgaagacgtggcagaa
gcttccgacaagcaggcagttgcagtaactcaggtaactcagggaatcgaacagatatca
agtgttgttcagaccaactctgcgacggcagaacagagtgcagctgccagcgaagagtta
tcaggccaggcccagatcatgaagggacttgtccagaagtttaagttatacgatggtgag
gcagccggtgaattccatagtgaaacaatacagcccgagcttcctcattatgaggaggaa
ccggaagcacctgcggtttctatagatcctgtttattttgaagacagtgactcttatgac
aacggtaaatattaa
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