Lacrimispora sinapis: VIG27_07130
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Entry
VIG27_07130 CDS
T10884
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lsia Lacrimispora sinapis
Pathway
lsia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIG27_07130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_07130
Transporters [BR:
lsia02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VIG27_07130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
IstB_IS21
AAA_22
AAA_30
KAP_NTPase
nSTAND1
AAA_19
ATP-synt_ab
AAA_16
AAA_23
PycTM
Motif
Other DBs
NCBI-ProteinID:
XIJ22619
LinkDB
All DBs
Position
1555540..1557279
Genome browser
AA seq
579 aa
AA seq
DB search
MKRYWRYIKPYLSAFILAPLLMLTEVFGEILLPKLTSMIINNGVADRDVGYIMRVGGVMI
FIAVIMAAGGIGGSYFSSKASICFSTDLRKDIFHKVQQFSFKNIDDFSTGSLVTRLTNDI
QQIQNVIMLSLRLMFRAPGMLVGGLIMAYLMNRQLVLILLVVIPLLLLAIFVILKAAFPR
FEAMQKKIDRLNSGVQEALTNVRVIKSFVREDYEAEKFKKTNRELKEGSLEAMKIVIATM
PVMMLAMNITTIAVVWYGGNLIIAGKMPVGDLTAFTIYIIQILMSLMLLSMVFLQASRAM
ASLKRVNEILDTEIDLTDDHSANKSAMVTKGKVEFRDVSFQYAKGTEEMVLKKINFTAEQ
GETIGIIGSTGSGKTSLVQLIPRLYDADQGQVLVDGIDVKDYSIKNLRESVAMVLQQNVL
FSGTIAENLRWGDENATMEDLIAMAESAQAHGFVSSFTDGYDTDLGHGGSNVSGGQKQRL
CIARALLKRPKILILDDSTSAVDTATETKIRECFQTTLKDTTKFIIAQRISSVENADKII
VLDEGEIVGMGSHEELMQSCEAYQEIYYSQRDRKEEVGA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgatattggagatatataaagccgtatctgagcgcatttattttggcaccgctg
ctgatgctgacggaagtttttggagagatactgcttcccaagctgacttccatgatcatc
aacaacggagtagcagatagagacgtaggatacattatgcgtgtgggcggagtcatgatt
ttcatcgccgttattatggctgcaggcggaattggaggttcctatttttcttcaaaggct
tcgatctgcttcagtacggatttaagaaaagacatttttcataaggttcagcagttttct
ttcaaaaacattgatgatttcagtaccggatcattggttaccaggctgaccaatgacatt
cagcagattcaaaatgttattatgctgagtctccgcctgatgtttcgggcccctggaatg
ctggtgggcggtctgatcatggcttatttgatgaaccggcagctggtgctcattctgctt
gtagtgattccattgctgcttttggctattttcgttatattaaaggcggcatttccccgg
tttgaggcgatgcagaagaagatcgaccgtctgaattccggtgtacaggaagcattgacc
aatgtgcgggtcatcaagtcttttgtaagggaagactatgaggcagagaaatttaagaaa
acaaacagagagttaaaggaaggcagtctggaagccatgaaaatcgttatagctaccatg
cctgtcatgatgcttgcaatgaacatcaccaccattgctgtagtctggtatggaggtaac
ttgattattgcagggaagatgccggtaggggatttgacggcattcaccatttatatcatc
cagattctcatgtccctgatgctgctttccatggtatttttacaggcctcccgtgcaatg
gcctccttaaagcgtgtgaatgagatcctggatacggagattgatttaacagacgatcat
tcggcgaacaaatcagctatggttaccaaaggaaaagtagagtttcgtgatgtcagcttc
cagtacgcaaaaggtacggaagagatggttttaaaaaagataaactttacagcggaacag
ggagagaccataggaattattggttcaacaggaagcggaaaaacttctctggtacaattg
attccccgtctttacgatgcggaccaggggcaggtgctggtagacggcatagatgtaaaa
gattattccatcaaaaatttaagagaaagcgttgctatggttttacagcaaaatgttctg
ttttcaggaaccattgcagaaaatcttcgctggggtgatgaaaatgcaaccatggaagat
cttattgcaatggcagaaagtgctcaggcccatggattcgtatccagttttaccgatggg
tatgatacggatttaggccacggcggttccaatgtttccggaggtcagaagcaacgattg
tgcattgccagagcattgttaaagagaccaaaaattctgattttagatgacagtacttcg
gctgttgatacggcaacagagaccaaaatccgtgagtgcttccagaccaccttaaaagat
accaccaaattcattatcgcacagaggatcagttctgtggaaaatgcagataagatcatt
gtactggatgaaggtgagatcgtgggcatgggatcacacgaagaactgatgcagtcctgt
gaagcttatcaggaaatctattattcgcagcgggatcgaaaagaggaggtgggtgcataa
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