Lacrimispora sinapis: VIG27_08150
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Entry
VIG27_08150 CDS
T10884
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia03030
DNA replication
lsia03410
Base excision repair
lsia03420
Nucleotide excision repair
lsia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VIG27_08150 (polA)
03410 Base excision repair
VIG27_08150 (polA)
03420 Nucleotide excision repair
VIG27_08150 (polA)
03440 Homologous recombination
VIG27_08150 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsia03032
]
VIG27_08150 (polA)
03400 DNA repair and recombination proteins [BR:
lsia03400
]
VIG27_08150 (polA)
Enzymes [BR:
lsia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VIG27_08150 (polA)
DNA replication proteins [BR:
lsia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VIG27_08150 (polA)
DNA repair and recombination proteins [BR:
lsia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VIG27_08150 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VIG27_08150 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
XIJ22810
LinkDB
All DBs
Position
1778280..1780829
Genome browser
AA seq
849 aa
AA seq
DB search
MMGEQMNRKRIVLIDGNSMIANAFYGMPSNAADAVIRLIKGILERREADYLAITFSAEDG
GGTLTEKALLQQKERLKELSDSLSISVLSEKGYESAELLASLAKSCETEGGDIQIISEDK
RLLQLVRDHVTVHIPSMGEEGLVLKSYSPADIEGEFGLEPVKLKGVFSLTKANGIGEKTA
CQLIKQYESIKNLFDHLEEVESLRIKEILKATEKEIKEEEKRNTLRDDCSLRLDDSNSIS
EAEIRQIMDMDFVPADFPDEENQESLEDFPVHLVTDFSEAETIFSKCLPDSRLGLHLVIE
DKAITALSLCLGQAQCYCIIPQGFLTSEYLAGKAEEISKKAGHVTVLDLKSQLPFLKLEA
GSPVFDAGVAAYLLNPLKDSYAYYDLAADYLDMTIPSRADLIGKSSIGRALEEKRDAAVS
CIGYMSYVAYRCGEVLPEELKKNGMDTLFYEIELPLIYSLYSMESAGIKVERDRLKEYGD
RLKVRIMELEQKIYEETGETFNINSPKQLGEILFDHMKIPGGKKTKTGYSTAADVLEKLA
PDYPVVNLILDYRQLTKLKSTYADGLAAYIGPDERIHGTFNQTITATGRISSTEPNLQNI
PVRMELGREIRKVFVPKEGCVFVDADYSQIELRVLAHMSGDQRLINAYKQAEDIHAITAS
EVFHVPLNEVTSLQRRNAKAVNFGIVYGISSFGLSEGLSITRKEASEYIEKYFETYPGVK
KFLDGLVAEAKEKGYAVSMFGRRRPVPELKSSNFMQRNFGERVAMNSPIQGTAADIMKIA
MIRVDQALKKQGLKSRIVLQIHDELLIETYRDELEQVKELLTEEMKHAADLLVSLEVEAN
VGESWFDAK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagaacagatgaacaggaaacgaattgtgttaatagatggaaacagtatgata
gccaatgccttttatggcatgccctccaatgcggctgatgccgtgatccgtctgataaaa
ggcattttggaacggagagaagccgattatcttgccataactttttcggctgaagacggc
ggcggcactctgacggaaaaagcgctgctgcagcagaaggagcggctgaaagaactgtcg
gattctcttagtatttctgtattatccgaaaaaggatatgagtctgcggagcttttggca
tcgctggcaaaaagctgtgaaacagaaggcggagatatccagatcatatcggaagacaaa
agacttttacagctggtgagagaccatgtaacggtacacattccttccatgggcgaggag
ggactcgttttaaaatcctactcgccggcggatattgaaggagaattcggtctggagccg
gtaaagctaaagggagttttttctcttacaaaggcaaacggcattggtgagaaaacagcc
tgtcagctgataaaacaatatgaaagtattaaaaatctttttgatcatctggaggaagtc
gaatctctcagaatcaaagaaatcttaaaagcaactgagaaagaaatcaaagaagaggaa
aagcggaacactctcagggatgactgcagtctccgtctggacgattcaaactctatctca
gaagcggaaatccgccagatcatggatatggactttgttccggcagattttccggatgaa
gagaaccaggagtctttggaagattttccggttcatttggtgaccgacttttctgaagcg
gaaaccatattttccaaatgtctgccggatagccgtctgggactgcacctggtcattgaa
gacaaagccataacagccttatccttgtgccttgggcaagcgcaatgttactgtatcatt
ccccagggatttttaacatcagagtatctggccggaaaagcggaggaaatctctaaaaaa
gcgggacatgtaaccgtactggatttaaagagccagcttcctttcttaaagctggaagcc
ggaagcccggtatttgatgcaggagtcgctgcatatctgctgaatccgttaaaggattcc
tatgcttattacgatctggcggcagattatctggatatgaccattccttcaagggctgac
ttgattggaaaaagttccattggccgggcattggaggaaaaaagggacgctgcagtttcc
tgtatcggctatatgtcttacgttgcttaccgttgcggggaagtacttcctgaggaacta
aagaaaaacggtatggacactctgttttatgagattgaactgcccctgatctacagcctc
tattctatggaatcagccggaatcaaggtagaacgtgaccggttaaaggaatacggggac
aggctaaaggtccgtattatggaactggaacaaaaaatatacgaagaaacaggagaaacc
tttaatatcaattctcccaagcagctgggggagattttgtttgaccatatgaagattccc
ggaggaaagaagacaaaaaccggatattctacggctgcagatgttttggaaaaactggca
cccgattatccggtggtaaacctgattttggattaccgtcagctgactaaattaaaatcc
acatatgccgatggcctggcagcgtatatcggaccggatgaacggattcatggaacgttt
aaccagaccatcactgccaccggaagaatcagcagtacagaaccgaatcttcaaaacatt
ccggtgcgtatggaactgggacgggagatccgtaaggtctttgttccgaaggaaggctgt
gtttttgtggatgccgactattcccagatcgagctgagggttctggctcatatgtcgggc
gaccagcggcttatcaatgcgtataaacaagcggaggatatccatgccattactgcgtcg
gaggtgttccacgttccgcttaatgaagtgacctctttgcagagaagaaatgcaaaagct
gtgaattttggaatcgtatatggaatcagttcctttggtttaagcgaaggattaagcatt
acccggaaggaagcatcggaatacattgaaaaatattttgagacctatccgggagtcaag
aaatttttagacggacttgttgcagaggcgaaggaaaaagggtatgcggtcagcatgttt
ggcagacgccgtcccgttcctgagctgaaatcttcaaattttatgcagcgtaattttggt
gagcgtgtggccatgaactcccccatccagggaaccgcagcagatattatgaagatcgcc
atgattcgcgtggaccaggcattgaagaagcagggattaaagtcccggatcgttcttcag
atacacgatgaactattgatagaaacctatcgggatgagctggaacaggtaaaggaactt
ttaacagaagagatgaaacatgcggcagaccttttagtatccctggaagtggaagcgaat
gtgggagaatcctggtttgatgcaaaataa
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