Lacrimispora sinapis: VIG27_08330
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Entry
VIG27_08330 CDS
T10884
Name
(GenBank) LytTR family DNA-binding domain-containing protein
KO
K07707
two-component system, LytTR family, response regulator AgrA
Organism
lsia Lacrimispora sinapis
Pathway
lsia02020
Two-component system
lsia02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VIG27_08330
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VIG27_08330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lsia02022
]
VIG27_08330
Two-component system [BR:
lsia02022
]
LytTR family
AgrC-AgrA (exoprotein synthesis)
VIG27_08330
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LytTR
Response_reg
MtrA
Motif
Other DBs
NCBI-ProteinID:
XIJ22846
LinkDB
All DBs
Position
complement(1816964..1817704)
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AA seq
246 aa
AA seq
DB search
MIHIYLCEDDNRQLTRWKTVIEKYLLMNSTESQLYCTVSKPEELLAMRKKSEITGLYFLD
IDLQAEKNGIELAQEIRKYDPRGYIVFITTHSEMAVLTFRYKVEAMDFIIKDNVKTLPEQ
ICACIKNAENNYRAQLDSSKRLLSVKIDKANLVLDQDDIIAITTSEDYHKIIIHTKNGTR
QMAGSLKEFKATLNSTFCQCSRSSIVNLKHVLKYSRDEALLTMDNKETYSVSIRMMGKVQ
RALKQI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgattcacatttacctatgcgaggatgacaacagacaattaacacgttggaaaacggtt
atagaaaagtacttattgatgaattctaccgaatcgcagctttattgtaccgtctctaaa
ccggaagaattgcttgccatgagaaagaagtccgagattaccggactgtattttttagat
atcgacttgcaggctgagaaaaacggaattgaactggctcaggaaatacggaaatacgat
ccccggggatatatcgtttttatcacgacccacagcgaaatggcagttctcactttccgt
tacaaagtggaggccatggattttattataaaagacaacgtcaaaactctgccggaacag
atatgtgcctgcatcaagaacgctgagaacaactaccgggcacagcttgattcctccaaa
cgcctgctatctgtcaaaatcgacaaggccaatctggtccttgatcaggatgacattatt
gcgattacgacaagtgaagattatcacaaaataatcattcacacaaaaaacggcacccgt
cagatggcaggttcattgaaagagttcaaggcaacattaaattctacattttgtcagtgc
agccgttcctccattgtaaatttaaaacatgtattaaagtattccagggatgaagcgctt
ttgaccatggataacaaagaaacttattctgtttccatacggatgatggggaaagtgcaa
agagcactgaagcagatttaa
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