Lacrimispora sinapis: VIG27_08725
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Entry
VIG27_08725 CDS
T10884
Name
(GenBank) HAMP domain-containing methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02020
Two-component system
lsia02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VIG27_08725
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VIG27_08725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lsia02035
]
VIG27_08725
Bacterial motility proteins [BR:
lsia02035
]
Flagellar system
Chemotaxis proteins
MCPs
VIG27_08725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
HAMP_2
PriC
Ndc80_HEC
DUF1664
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
XIJ19637
LinkDB
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Position
complement(1898269..1900065)
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AA seq
598 aa
AA seq
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MKEKKEPKVFLKKLPVKWKLTVGFGIVFIILVVSMATSAISISRIGEQVRMYSKFTYPLT
TYNLTAQVNMVSVQRYLVMAIIDKEVGKDYQESLDLSDKSVEGFKKNMEAFSSGQRSSAN
DENIAQVMEYVTKAEAARKKIVDLIKDPTKKDTKTAYALFYDEFVPAFNQIAKLMDDMNA
AGAQKEAIQAKTTSNILSQSWITLIVVLISAILATGGVIFVLVRAILTPVREIEEVYGEM
AKGNLHKKIHYESEDELGRMAASIRDTNERLTTYIEDIIAKLTSLSHGDMCISVDLDYVG
DFAAIKQSLIKTTAALNSTMLVIQSSADQVNSGAGQVADASQALASGATEQAATIEELSS
AIQSVTEKAEKNTVSVRKATEYVKQAGDGVFQSNDYMKNLNAAMREISQSSEEISKVTKL
VEDIAFQTNILALNAAVEAARAGEAGKGFAVVADEVRNLAAKSAEAAKQTADLILKSNSK
VLEGEKIANETLLLLDEVSKKASMVSTSIKEIESDSLDQTEAIVQINQGLSQVSAVVQTN
AATAEESSASSEELTAQAEVLRDELAKFKLSTNRSVPVRDSVPAEDISYRSENSLGKY
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaaaaaagaaccaaaagtttttctaaagaagctgccggtcaaatggaagctt
acggtaggatttggaattgtatttatcatattagttgtgtctatggctacttcagccata
agcatatcccgtattggagagcaggtcagaatgtactcaaaattcacttacccgcttacc
acctataatttaactgcacaggtcaacatggtttccgtacagcggtatctggtgatggca
atcatagataaagaagtcggtaaagattatcaggaatctcttgacttatcggacaagagc
gtggaaggctttaagaagaacatggaagcattttcttccggacagcgcagttcagccaat
gatgaaaacattgcccaggtaatggaatatgtaacgaaggcggaagcagcccgcaaaaag
attgttgatctgattaaagatccaacgaaaaaagacacaaaaacagcttacgctctgttc
tatgatgagtttgtaccggcattcaaccagattgccaaactcatggatgacatgaatgcg
gcaggtgcgcagaaagaagcaatacaagcaaaaacaaccagcaatattctttcacagtcc
tggataactttgattgttgttctgatttctgccattttagccactgggggtgtgattttt
gtactggtacgtgccattcttactccagtcagagaaattgaagaagtatacggagaaatg
gcaaaaggaaatcttcataaaaaaatccattatgagagtgaagacgaactcggccgtatg
gctgcaagcattcgggataccaacgaaagacttacgacatatatcgaagatatcattgca
aagctgacatcgctttcccacggggatatgtgcatttccgttgatttggattatgtagga
gattttgctgcaattaaacagtccctgatcaagactacagcggcactgaattcaaccatg
ttggtcattcaatcatctgcggaccaggttaattccggtgccggacaggttgcagacgca
tcccaggcacttgcttcaggcgccacagagcaggccgccaccatagaggaattgtcctct
gccattcaaagcgtaacagagaaagcggagaagaatactgtctctgtgcgtaaagccact
gagtatgtaaaacaggctggagacggtgtattccaaagcaatgactacatgaaaaacctc
aatgcggcaatgagggagatcagccagtcttcggaagaaatatccaaggttacaaagctt
gtagaagatattgcattccagacaaacatactggctctaaacgcagctgtggaagcagcc
agagcaggagaagcaggaaaaggcttcgcagtggttgcggatgaagtcagaaatctggcc
gcaaaatctgcagaagcagcgaaacagaccgcagacttgattttgaaatccaacagcaag
gtattggaaggagaaaagatagccaacgaaaccctgttgcttttggatgaagtttcaaag
aaggcttctatggttagtacatccataaaggaaattgaatcagattccttagatcagacg
gaggcaatcgtacagatcaaccagggattatcacaggtgtctgcagtggtgcagaccaat
gcggctactgcagaggaaagctctgcctccagtgaggaactgaccgcacaggccgaagtc
ctgcgggatgaactcgctaagtttaaactttctaccaatagatcggttccagtgagggac
tctgtaccggcagaagatatttcataccgttcagagaattcattaggaaagtactag
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