Lacrimispora sinapis: VIG27_08945
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Entry
VIG27_08945 CDS
T10884
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lsia Lacrimispora sinapis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsia03009
]
VIG27_08945 (rimO)
Enzymes [BR:
lsia01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
VIG27_08945 (rimO)
Ribosome biogenesis [BR:
lsia03009
]
Prokaryotic type
ribosomal protein modification factors
VIG27_08945 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
XIJ19681
LinkDB
All DBs
Position
complement(1941574..1942914)
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AA seq
446 aa
AA seq
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MKLLCISLGCDKNLVDTEMMLGLLNKDGYTFTDDEYEADVIVINTCCFIGDAKEESINTI
LDMAQRKIDGNCKALIVTGCLAQRYKQEIIDEIPEVDGILGTSTYDEISNVLQEALGGKE
HVQRFHELEGIPEVEAGRVLTTGGHYAFLKIAEGCDKHCTYCIIPTLRGNYRSVPMERLL
KEAEDLAQKGVKELILVAQETTLYGVDLYGKKSLPELLKKLCRISGIQWIRIQYCYPEEI
TDELIQTIKEEEKICRYLDLPIQHASDKILKRMGRRTTKDQLRSIVGKLRKEIPDIALRT
TLISGFPGETEADHEELMEFVDEMEFERLGVFAYSAEEDTPAAEFPDQVLQEVKEERRDA
IMELQQEISLEHSNSMIGKTVEVMIEGKVADENAYVGRTYMDGPGVDGMIFVQTGEELMS
GDFARVRVTGAMEYDLMGELEDEFTE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattatgtatttcactgggttgtgacaagaatcttgttgatacggagatgatg
ttgggccttctgaataaagacggatatacctttaccgacgatgaatatgaggcagacgtg
attgtcatcaatacctgctgttttatcggagatgcaaaagaagaaagcatcaataccata
ctggatatggctcagagaaagatagacggcaactgcaaggcgcttattgtaacgggctgt
cttgcccagcggtataagcaggagattattgacgagattccggaagtggatgggattctt
ggaacctccacctatgatgagatctccaatgttctacaggaagctttgggcggcaaagaa
catgtacagcgctttcatgaactggaaggcattccggaagtggaggcaggacgtgtactt
acgaccggaggccattacgcattcttaaagattgcagaaggctgtgacaaacattgtact
tactgtatcattcccacacttcgcggaaactaccgcagcgttcccatggaacggctttta
aaagaagcggaagacctggcacagaagggggtaaaggagctgattcttgtggctcaggag
accactctttacggtgtggacttatatggcaaaaaatcccttcctgaattattgaaaaag
ctttgccgcatttcgggcattcagtggattagaatccagtactgctatcctgaggagatt
acggacgaactgattcagaccataaaggaagaagaaaagatctgccgttatctggatctg
ccgattcagcacgccagtgacaagattttaaagcgcatgggacgcaggaccaccaaggac
cagcttcgcagcattgtaggaaagcttcggaaagaaattccggatatcgcactgcgtacc
acactgatttccggtttcccaggggaaacagaggccgaccatgaggaacttatggaattt
gtggatgagatggaatttgaacgtcttggcgtattcgcatattctgcagaggaagatact
cccgccgctgagttcccggatcaggtgttacaggaagtgaaggaggaacgccgggatgcc
atcatggaactccagcaggaaatttcccttgaacactccaattccatgattggaaaaacc
gtagaggtgatgatcgaaggcaaggtagcggacgaaaatgcgtatgtaggccgtacttat
atggatggaccgggtgtggatggaatgatattcgttcagaccggggaggaattgatgtca
ggtgattttgccagggttcgggtaaccggagctatggaatatgatttgatgggagagttg
gaagatgaatttaccgaataa
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