Lacrimispora sinapis: VIG27_09075
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Entry
VIG27_09075 CDS
T10884
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia02024
Quorum sensing
lsia03060
Protein export
lsia03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VIG27_09075 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VIG27_09075 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VIG27_09075 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lsia02044
]
VIG27_09075 (ffh)
Enzymes [BR:
lsia01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
VIG27_09075 (ffh)
Secretion system [BR:
lsia02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VIG27_09075 (ffh)
Eukaryotic Sec-SRP protein
VIG27_09075 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_33
APS_kinase
cobW
ParA
AAA_17
AAA_31
AAA_30
Thymidylate_kin
nSTAND3
AAA_19
SelO
NPHP3_N
TsaE
ArsA_ATPase
MMR_HSR1
AAA
Motif
Other DBs
NCBI-ProteinID:
XIJ19706
LinkDB
All DBs
Position
complement(1965989..1967341)
Genome browser
AA seq
450 aa
AA seq
DB search
MAFESLSDKLQNVFKNLRGKGRLSEADVKTALKEVKMALLEADVSFKVVKQFISAVQERA
IGQDVQNSLTPGQMVIKIVNEELVNLMGSDTTEIQLKPASDITVILMAGLQGAGKTTTTA
KIAGKLKAKGRKPLLVACDVYRPAAIKQLQINGEKQGVPVFSMGENHKPADIAKAAIASA
AKNDQNVVILDTAGRLHIDEDMMNELIEIKEVVAVDQTILVVDAMTGQDAVNVAGMFNDK
IGIDGVIVTKLDGDTRGGAALSIRAVTGKPVLYVGMGEKLSDLEQFYPDRMASRILGMGD
ILSLIEKAENQVDEEKAKELSQKLRKAEFDYNDFLEQMSQVKNMGGMASIMSMMPGMNQL
KDIDIDEKAMDRVEAIILSMTDKERTNPELMKNASRKQRVAKGAGVDISEVNRIVKQFDQ
MKKMMKQLPGLMGGGKRHGGGLFGKLKLPF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgagagcttatccgacaaattacaaaacgtatttaagaatttgagaggcaaa
ggacgtttgtctgaggccgatgtaaaaacagcacttaaagaagtcaaaatggctttgttg
gaagccgatgttagctttaaggttgtaaagcagtttatcagtgctgtacaggagcgtgcc
attggacaagatgtccagaacagcctgactccgggacagatggtaataaagattgtgaat
gaagaactggtaaacttaatgggctctgatacaacagaaatccagttaaagcctgccagt
gatatcactgtcattttaatggccggtcttcagggtgccggtaaaaccacaaccacagcc
aagattgccggtaagttaaaggcaaagggcagaaagcctctgctggttgcctgtgacgtt
taccgtcctgccgcaatcaagcagctccagatcaacggagagaagcagggtgtcccggtt
ttttccatgggggaaaatcataaaccggctgacattgctaaggcagccattgcgtctgcc
gcaaagaatgatcagaatgtggtgattctcgatacagccggacgtcttcatattgatgag
gacatgatgaatgagctgattgaaatcaaagaggtggtagcggttgaccagaccattttg
gtggttgatgccatgactggacaggatgcggtgaatgttgccggaatgttcaatgataag
attggcattgacggtgttatcgttacaaagcttgatggagatacccgaggaggtgcggct
ctttcgatccgtgcggttaccggaaagccggttctttatgtgggtatgggcgaaaagctt
tctgatttagaacagttttatccggatcgtatggcctccagaattcttggcatgggagac
atcctttctctgattgagaaggcagaaaaccaggtcgacgaagaaaaggcaaaagagcta
tcccaaaagctccgaaaagcggaatttgattataatgacttcctggaacagatgagccag
gtcaagaatatgggcggaatggccagcattatgagcatgatgccaggcatgaatcaattg
aaagatattgatattgatgaaaaagccatggaccgtgtggaagccatcattctttccatg
acagacaaagagcggaccaatccggagcttatgaagaatgcttccagaaagcagcgcgtg
gcgaaaggtgccggcgtggatatcagcgaagtcaaccgtatcgtcaaacagtttgaccag
atgaagaagatgatgaaacagcttcccggtttgatgggaggaggcaaacgtcatggcggc
ggattgtttggcaaactcaaattaccgttttaa
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