Lacrimispora sinapis: VIG27_09395
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Entry
VIG27_09395 CDS
T10884
Name
(GenBank) ABC transporter substrate-binding protein
KO
K17234
arabinooligosaccharide transport system substrate-binding protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIG27_09395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_09395
Transporters [BR:
lsia02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinooligosaccharide transporter
VIG27_09395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Rsbr_N
TRIM_CC
Motif
Other DBs
NCBI-ProteinID:
XIJ19766
UniProt:
A0ACH3DKU7
LinkDB
All DBs
Position
complement(2033445..2034821)
Genome browser
AA seq
458 aa
AA seq
DB search
MKKRGLAALLCLAMGASMIAGCSSSTGGNAGETTKGALSAGKKTMEVGGDDVTTLNVWTF
IELHQDFYVAMAEKWNEAHPDKKVKLVLSNMPYDDMHNKLSLALESGEGAPDIVDIELGK
FPAFMVGKIGLMELNDAIEPYRKNIVQSRLDIYSKDGKEYGLPTHVGTTVAFYNDKLLKE
AGINYEDIKTWDQFKEAGVKYHEATGKYFSCVETSAQWMVNLMLAQKGGDYIEKDGKLNL
TSKEMTEVLEYIKGMQETGAFATIPGGQPDNEEAYPFYNNGDYAVQIMPFWQTSRYVNYM
SDIKKQVAIANVPVWKEQDGEIATIGGGGTGTAIVKSGEHAELAAEVMAFIKLSEESNKE
VWNVLGFDPVNTAVWTDQTLTQNPENKFIQYFTNNPFDTLLHTKDSIGILQAYTDEKYPS
INNEFCNVTLNSIFEDGMDVTEALKQSQETLNNEFKEN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaggggattggcagcattgctgtgtctggcaatgggggcatccatgattgca
ggatgcagcagttcgactgggggaaatgcgggggaaaccaccaaaggtgcgttgtctgcc
ggaaagaaaaccatggaggtggggggagatgatgtcaccaccttaaatgtatggacgttc
atcgagcttcaccaggatttctatgttgccatggcagaaaagtggaatgaggctcatccg
gacaaaaaagtaaaactggtgctgagtaatatgccctatgatgacatgcacaataaatta
tcccttgctctggaatccggggaaggggcaccggatatcgtggatatcgagcttggcaaa
tttccggcatttatggtggggaaaatcggtttgatggagttaaatgatgccattgaacca
tataggaaaaacatcgtccagtccagacttgatatttactccaaagacggaaaggaatat
ggacttccgacacacgtaggaacaacggtggctttttacaatgataagctgttaaaggag
gccggaatcaactatgaggacatcaagacctgggaccagtttaaggaagccggagtgaaa
tatcacgaagctacgggaaaatatttttcctgtgtggagacatcggctcagtggatggta
aacttaatgctggctcaaaagggcggagactatattgagaaggacggaaaactgaatctg
acaagcaaagagatgaccgaggtactggaatatatcaagggaatgcaggaaaccggtgca
tttgccacgatcccaggaggccagccggataatgaagaagcatatcccttctataataac
ggtgattatgctgtccagatcatgccgttctggcagacctccagatatgtcaattatatg
agtgacatcaagaaacaggtagccattgccaatgttcctgtatggaaggaacaggatggt
gagattgcgaccatcggcggcggcggaaccggaacggccattgtaaaaagcggagaacat
gcagagctggccgcagaagtcatggctttcattaagctttcagaagaatccaacaaagaa
gtctggaatgtgcttggatttgatcctgttaatacggcagtctggaccgatcagacgctt
acacaaaatcctgaaaacaagtttatccagtattttaccaataatccgtttgatactctg
cttcataccaaggacagcattggcatcctgcaggcatataccgatgaaaaatatccgtcc
atcaacaacgaattctgtaatgtcacattaaacagcatttttgaagacggaatggatgtg
acagaggcacttaaacagtcacaggaaacccttaacaacgaatttaaggagaactaa
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