Lacrimispora sinapis: VIG27_09955
Help
Entry
VIG27_09955 CDS
T10884
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
lsia Lacrimispora sinapis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_09955
Transporters [BR:
lsia02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
VIG27_09955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
XIJ19865
LinkDB
All DBs
Position
2145363..2146793
Genome browser
AA seq
476 aa
AA seq
DB search
MSVKASLSAKDAKFRNFALNDNMWRVVLYVGLPLALYQSLNQLFKIFDSMMAAHISATSV
SAVAYLSQINLTLSALGGGLAIGSSLKISEAYGAGDFGLVKKRVSSLFAMCGILGGVILI
LLIPLAPEFLRFAKTPDSFIAEGTQYFRLELVGMVINFFNNVYIAIERARGNSKRILHLN
IGVIAIKLTMTALFVYVLNSGINMISVATIISQCFLLSAAMVNLNEKDNAFGFSVHSISL
KPLVTKPMITLSIPVIMEKMAFSFGKVIINSMSTIYSSLTVGALGISNNIGGITTMPQMG
FQEGGSAIISQSMGAGKPKRALKAFGCILVINVIIGAVLMSFSLLFLHQISSLFAGNDKE
FRTMISSIYRYEAYGAIPLGINSSVLALLYGFGKTKITLTLNFCRVFIFRVPVLWLLQNY
TDLGSTSLGLVMAISNTATGAMAFLIGIIEIRRICRQHNLTFSRLSFRKNTITEQS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcaaagcaagcttatccgccaaggatgcaaaattccggaattttgcattaaac
gacaacatgtggagagtggtcctctatgttggcctcccactggccttataccagagctta
aaccagctttttaaaatatttgactccatgatggcggcccacatcagcgccacttctgtc
tcagcggtggcttatttatctcagatcaatttgacgctttccgccttgggcggcggtctt
gccatcggttccagcctaaagatcagtgaagcctacggtgctggtgattttggactggta
aaaaaacgggtcagcagcctgtttgccatgtgcgggatcttagggggcgttatcctgatt
cttttaattccccttgcgcctgagtttttaagatttgcaaaaacaccggacagctttatt
gctgagggaacccagtatttccggctggaactggtgggaatggtcataaacttttttaat
aacgtttacatcgccattgaacgtgcccggggaaactccaagaggattctgcacttgaat
ataggagttattgccattaagctgaccatgaccgccctgtttgtttatgtactgaattcg
gggatcaatatgatttccgtagcgacaataatttcccagtgttttcttttgtctgccgct
atggttaatttaaacgagaaggacaatgcgtttggcttttcggttcacagcatcagctta
aaaccattggtcaccaaaccgatgatcactctttccattccggtcattatggaaaaaatg
gcgttttcctttggaaaagttatcataaactccatgagtaccatatacagttctctgacc
gtaggcgctcttgggatttccaacaacatcgggggaatcactaccatgcctcagatgggg
tttcaggagggcggctctgccattatcagccagagcatgggcgccggaaaacccaaacgg
gccttaaaagcctttgggtgcattttggtcatcaacgtgataatcggtgcagtacttatg
tccttttcccttttatttctacaccagatcagcagtctgtttgccggaaatgataaagaa
ttcagaacaatgatttcctccatctaccggtatgaagcatatggtgccattccgctggga
ataaattcctcggttcttgctctgttatacggattcggaaagaccaagatcaccctgacc
cttaacttttgccgggttttcattttccgtgtacctgtgctctggcttttacagaactat
acggaccttggcagtaccagccttggccttgtgatggcaatcagcaatactgccacagga
gcaatggcttttctcatcggaatcattgaaatccgcaggatctgccgccagcacaacctg
acattttcccggctttcctttcgtaagaatacaatcacggaacaatcataa
DBGET
integrated database retrieval system
