Lacrimispora sinapis: VIG27_09975
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Entry
VIG27_09975 CDS
T10884
Name
(GenBank) SNF2 helicase associated domain-containing protein
Organism
lsia Lacrimispora sinapis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
XIJ19869
LinkDB
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Position
complement(2150267..2153416)
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AA seq
1049 aa
AA seq
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MKVSHMTTNAFWKGESGVRAVVEDQGNEYKASLHIKGSQVIDYSCSCALGNSYRGMCSHC
QALFSAYKAQEMENQGRMVTTSQQARAMIREYTNREVARIMSEEEGEQIKLLVAMVAGRR
EVKLEFKLGRDRLYMIRDLSAFVKAVESGTFVEYGKKLSFHHSVSAFLKESRPLLEFVME
VVNTYLEHHKQFQKSSFSASPVMRFLNLSRTTIDRFFQIMKNRTLEIEDYKGQKRQVEVT
ERTPELTVTVRREGREGVSVSIDKDLMVFEGQHHLYFADAHYLYCCDQSCSEALGVFFKQ
MMEGYGFKYETEINNKDMPLFYERVLKKIAAYCTIDSGDLDLEQYKPEELKARFYFDSDG
PNNLTLKPTLFYGDYSFQPVEDERLPRTVCRDVPGEFRISQLITKYFKYREYDSSYPAIR
NDEEAVYRLLIDGIQEFMNYGEVYFSESFKKLKVLPPPKVSVGIRSVGNWLELHVDTEGL
SGEELNRLLSEYSKKKKFYRLKNGEFLNLDDNGLLSVAKLMEDMSLDLSDLENKTFRLPK
YRALYLDGLLKEGSGITLYRDQLYKAVVRGMKSVEDSDFEVPQALRQILRGYQKTGYRWL
KTLDHYGFGGILADDMGLGKTIQVISLLLDEKEKQESSVSLIVCPASLVYNWENELRMFA
PELKVLTVTGMAADREEMLTHMAGNDVLITSYDLLKRDIPFYEGKSFRFQIIDEAQYIKN
ASTQSAKAVKGIEAQSRFALTGTPIENRLSELWSIFDYLMPGFLFSYQKFKKEYETPIVK
DQEPSVLENLHRLIGPFILRRLKKDVLKELPDKLETVVYSAFDKKQKDIYTANAYRLKKE
LERMEGKSGKDNIQILAELTRLRQICCDPHLCYGDYSGESAKLETCMDLVRNGVEGGHKI
LLFSQFTSMLEIISQRLKKEEIPFYILTGATPKEERLHMVNSFKEDEIPLFLISLKAGGT
GLNLTAADIVIHFDPWWNVAAQNQATDRAHRIGQEKQVSVFKLITKGTIEENILKLQESK
KDLAEQIITEGTISLSNLSREDLLGLLNE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatcacatatgacgacaaatgccttttggaaaggtgaatcaggcgtcagagcg
gtagttgaggatcagggaaatgaatataaggcaagtttgcatatcaagggtagtcaggta
atcgactactcttgttcctgtgccctggggaattcttaccgggggatgtgttctcactgt
caggcacttttttctgcatacaaagcccaggagatggaaaatcagggcaggatggtaact
acttcccagcaggccagagccatgatccgggaatacaccaatcgggaagtggcccgcatc
atgagcgaagaagaaggggaacagatcaagcttttagtcgctatggtggccggccgcagg
gaagtaaaactggaatttaaattgggaagagaccggctttatatgatcagggatctttct
gcttttgtaaaagcggtggagagcgggacctttgtggaatatggaaaaaagttatccttt
catcacagcgtttcggctttcctgaaagaaagccgtcctcttttggaatttgtcatggaa
gttgtaaatacctacttagaacaccacaagcagtttcaaaaaagctcattttccgccagt
cctgtcatgcgctttttaaatttaagccgtaccactatcgaccgcttttttcaaatcatg
aaaaacaggactctggaaatcgaggattacaaagggcagaaacgccaggtcgaggttacg
gaacgtactcctgagctgacggtaacggtaagaagggaaggcagagaaggtgtatccgtt
tccatagacaaagatctgatggtatttgaaggccagcatcatctttatttcgcagatgcc
cactatctttactgctgtgaccagtcctgcagcgaggctctgggggtattctttaaacag
atgatggaagggtatggcttcaaatatgagactgagatcaacaacaaggacatgcctctc
ttttatgaacgtgtcttaaaaaaaattgccgcttactgtaccattgattccggtgatctt
gatttggaacaatataagccggaggagttgaaggcccgcttttactttgattccgacgga
ccaaacaatctgactttaaagccgacactgttctatggggattattccttccagccggtg
gaggatgaacggcttccccgcaccgtatgccgggatgtgccgggtgagttccgcatcagt
cagctgataaccaaatattttaaatacagggaatatgattcttcttatcccgccatccgc
aatgacgaagaggcggtatatcgtctgctgatagacggaatacaggaatttatgaactat
ggagaggtttacttttcagaatcctttaaaaaactaaaggtattgcctccgccaaaggtt
tccgtaggaatccgaagcgtcggcaactggctggagcttcatgtggatacggagggattg
tccggagaagaattaaaccgtctgttatcagagtacagtaagaaaaaaaagttttaccgt
ttgaagaacggagaatttttaaatcttgatgataacggacttctttcggttgcaaagctt
atggaagatatgtcgttggacctttctgatctggaaaataaaaccttccgtctgccaaag
taccgtgccctttatctggatggactgctgaaagagggaagcggtataactctataccgg
gaccagctatataaagcagtggttcgtggcatgaaatccgtggaggacagtgattttgag
gtcccacaagcccttcggcagattttaagaggatatcaaaagacgggataccggtggcta
aaaactctggatcattacgggtttggcggtatactggctgatgatatgggactggggaaa
accatacaggtcatttccctgctgcttgatgagaaagaaaagcaggagtcttcggtttcc
ctcatcgtctgtcctgcgtcacttgtctataactgggagaatgagcttcgcatgtttgca
ccggagcttaaagttctgactgtgaccggtatggccgctgaccgggaggagatgcttacc
catatggccgggaatgatgtgctcattacttcttatgatttgttaaaaagagacattccg
ttttatgaagggaagtccttccgtttccagatcatagatgaggctcaatatattaaaaat
gcttccacccaaagtgcaaaggcagtcaaagggatcgaggcccaaagccggttcgcgctg
accggaacgcccattgaaaaccgcttgtccgagttatggagtatttttgattacctgatg
cccggatttttgttcagctaccagaaatttaaaaaagaatatgaaacgccgattgtcaaa
gaccaggaaccttctgtattggagaacctgcaccggctcatcggaccatttatcctacgg
cgtttaaaaaaggatgtattaaaagaacttcccgataagctggagactgtggtttattcc
gcttttgataaaaaacagaaggatatttatacggccaatgcataccggctgaaaaaagaa
ctggaacggatggagggaaaatcaggaaaggacaacatccaaattcttgccgagcttacc
agactgcggcagatatgctgtgatcctcatctgtgctacggagattacagcggggaatcc
gcaaagcttgaaacctgtatggatcttgtgaggaacggagtagagggaggtcataagatt
cttcttttctcccagtttacatccatgcttgagatcatcagccaaaggcttaaaaaagaa
gagattccattttatattttaaccggagccacccccaaagaggagcgtctgcatatggtc
aactcctttaaggaggatgaaattcctctgtttctcatttctctgaaagcgggagggacc
gggcttaacttaacagccgcggatattgtgatccattttgatccatggtggaatgtggcg
gcccagaatcaggcgacagaccgggcccaccggatcggccaggaaaagcaggtgtctgta
tttaagctgattacaaaaggaacgattgaggaaaatattttaaaattgcaggagtcaaaa
aaagacctggcggaacagattattacggagggaaccatttcccttagtaatttaagccgg
gaagatttattgggtctattaaatgaatga
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