Lacrimispora sinapis: VIG27_10520
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Entry
VIG27_10520 CDS
T10884
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
lsia Lacrimispora sinapis
Pathway
lsia00550
Peptidoglycan biosynthesis
lsia01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VIG27_10520
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lsia01011
]
VIG27_10520
Peptidoglycan biosynthesis and degradation proteins [BR:
lsia01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VIG27_10520
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Gene cluster
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Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
NirdL-like_HTH
CBL
Motif
Other DBs
NCBI-ProteinID:
XIJ19977
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Position
complement(2270765..2272525)
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AA seq
586 aa
AA seq
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MNSNKTHHREKIALLFFLLFLAMTGLMGRLIFLMIFRSEHYSAMAEDLHERERTIKAARG
NIVDANGTVIATNRTVCTISVIHNQIKQPDEVVAVLSKELGISEDEVRKKVKKYSSREII
KTNVDKALGDQIRTYHLAGVKVDEDYKRYYPYDTLASKVLGFTGGDNQGIIGLEVKYEQY
LKGTNGKILTMSDAAGIEIENAAEDRIEPVAGQDLQISLDVNIQRYCEQAAYQVMERKHA
KKVSIIVMNPQNGEIMAMVNAPEFNLNDPFTLNTTAEIPATDKEKQDLLNQMWRNPSIND
TYEPGSTFKIITAAAGLEAGVVKLDDHFSCPGFRVVEDRKIRCHKVGGHGSETFLQGMMN
SCNPVLIDVGQRLGVDNYYKYFEQFGLKGKTGIDIPGEASTIMHRKQDMGLVELATVSFG
QSFQITPMQLITTSASIVNGGNRITPHFGVKAVSPDGETSHNFTYPVKKGIVSPQTSETM
RYILEQVVSEGSGKRAKLEGYRIGGKTATSEKLPRSLKKYISSFVGFAPADNPQVIALIT
IDEPEGIYYGGTIAAPVIADVFKNILPYLGIEPTEEKTVSTFRISG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaacaaaacacatcacagagagaaaatagccctcctgtttttcctgttattt
cttgccatgacaggacttatggggcggcttatttttctgatgatattccgttccgagcat
tacagtgcgatggctgaggatctccatgagcgggaaaggaccataaaggctgcccggggg
aatatcgttgatgccaatggtaccgtcatcgctaccaaccggacggtatgtacgatttca
gtcattcacaatcagatcaaacagccggatgaggtggtggcggtcttgtccaaagaactg
gggatcagtgaagatgaagttcgtaaaaaggtaaagaaatacagttccagggaaattatt
aaaaccaatgtagacaaggccctgggagaccagatcaggacttatcacctggcaggtgtc
aaggtggatgaagattacaaacggtattacccatatgatacccttgcttcaaaggtattg
ggattcaccggaggagataatcaggggatcatcggtctggaagtaaaatacgaacagtat
ttaaaaggaacaaacggaaagattttaaccatgtcagatgcagcgggaatcgagattgaa
aatgcggcagaagaccggattgagccggttgcaggtcaggatttgcagatcagtctggat
gtgaacatacaaagatattgcgaacaggcagcttatcaggtcatggagagaaaacatgca
aaaaaggtgtcgattattgttatgaatcctcagaatggggaaataatggctatggtcaat
gcacctgaatttaatttgaatgatccgtttacactaaatacaacagctgagattcctgct
acagacaaagaaaaacaggatctgttgaaccagatgtggagaaatcccagcatcaatgat
acgtatgagccgggttccacctttaagatcattactgcggcggccggactggaagccgga
gtggtaaagcttgacgatcatttttcctgtcccggattccgcgtggttgaggaccggaag
ataagatgccacaaagtaggcggtcatggttcagaaacatttcttcagggaatgatgaat
tcctgtaacccggttctgattgatgtaggacagcggctgggtgtggataattactacaaa
tattttgaacagtttgggttaaaaggaaagacagggatcgacattcccggagaagcatca
acgattatgcaccggaaacaggatatgggcctggtggagctggcgactgtgtctttcgga
cagtcattccagattacgcccatgcagcttattactacctccgcatcaattgtaaacggc
ggcaaccggatcacgcctcattttggagtaaaagcagtcagcccggatggagaaacatcc
cataattttacttatccggtaaaaaagggaattgtatctccccagacaagtgaaaccatg
cgctatattctggaacaggtagtatctgaaggaagcgggaaaagagcaaaactggaaggg
tatcggatcggcggtaaaactgctacgtctgaaaagcttcccagaagcttaaaaaagtat
atatcttcctttgtaggctttgcgcccgcagataatccccaggtgattgcattgattacc
attgatgaaccagaggggatctactatggaggaaccattgctgcaccggtcatcgcggac
gtttttaagaatattcttccttatttgggaattgagccaacagaggaaaaaactgtttct
acgtttcgaatcagtggttga
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