Lacrimispora sinapis: VIG27_10695
Help
Entry
VIG27_10695 CDS
T10884
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia00550
Peptidoglycan biosynthesis
lsia01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VIG27_10695
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsia01002
]
VIG27_10695
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lsia01011
]
VIG27_10695
Enzymes [BR:
lsia01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VIG27_10695
Peptidases and inhibitors [BR:
lsia01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
VIG27_10695
Peptidoglycan biosynthesis and degradation proteins [BR:
lsia01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
VIG27_10695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Choline_bind_1
Choline_bind_3
Choline_bind_2
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
XIJ20008
LinkDB
All DBs
Position
complement(2309045..2310376)
Genome browser
AA seq
443 aa
AA seq
DB search
MTNKSPRLWSLAISFSILASIPAYGTVPVVQPFPGSSGQTSETTAGTVAGPGASLSGQKP
AETSAGTQTQEENGTANVSQPQILSEGAVLLDASTGTVLYGKNAETRYYPASITKLMTAL
IVAEKASLSDTVTYSKTATTNLESGAVTLGLVEGDRLTVEQSLYGLMLKSANEAANGLAE
HVSGSISAFCAQMNARAKELGCTNTNFVNPNGLNHSDHYTTPHDMALIARAAFNNDIVRK
VASTTSYQIPATKKAGARTVTMGHKMLHPSDSRYYPGVIGGKTGYTSLAGNTLVTCAEKN
GVRLVAVVMKSRSTHYSDTKALLDYGFAVKAGATSVSSNSSTGWEKNGTKWYYKKPDGRK
ASQEWLKVDGADYYFDSDGTMATGWREFPGNVWYYFRSSGALARNYWVKSSGKWYYIGGD
GTMLKNAVTPDGYQVDSAGVWIP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaatcaccaagactatggagtcttgcaatcagtttcagcatactcgcatcc
atcccggcttatggcaccgtccccgttgtacagccttttccaggctcttccggtcagacc
tcggagaccacagccggaaccgttgcaggaccgggggcttctctgtccggtcaaaagccg
gcagagacttccgccggaacccagacccaggaagaaaacgggactgccaacgtatcacag
cctcagattttatcggaaggggccgttcttctggacgcttccaccggaaccgttctctat
ggaaagaatgcggaaaccagatattatccggccagcatcacaaagcttatgaccgctctt
attgtggcagaaaaagccagcctttccgatacggttacatattcaaaaaccgccacaacc
aatctggagtcaggagctgtaacgctgggacttgtagaaggggacaggctgaccgtggag
caatccctttacggccttatgctgaaatccgccaatgaagccgccaatggtctggcagag
cacgtttcaggcagtataagtgcgttttgtgcacagatgaacgccagggcaaaggagctt
gggtgtaccaacaccaactttgtcaatcccaatggcctcaatcattccgatcattatacc
acgcctcatgatatggctctgattgccagggcggcatttaacaatgatatcgtaagaaaa
gtcgcttcaaccacaagctaccagattcctgctacaaaaaaagcaggagccagaaccgtt
accatgggacataagatgctccatccttctgattcacgctattatcctggtgtcattggc
ggtaagaccggttatacgtctcttgcgggaaatacgctggtcacctgtgcggaaaagaac
ggtgtccgactggtcgcagtggtgatgaagagcagatccacccattattcagataccaaa
gccctgttggattacggatttgccgttaaggcgggcgcaaccagcgtatcctcaaattcc
tccaccggctgggaaaagaatggaacgaaatggtactataaaaagccggatggcaggaag
gccagtcaggaatggctgaaggtagacggagccgactattattttgattccgacggaacc
atggccaccggctggagggagtttcccggcaatgtgtggtattacttccggtcaagcggc
gccctggcccgtaattactgggtgaaaagcagcggtaagtggtattatatcggaggagac
ggcaccatgctgaagaatgcggtcacacctgacggatatcaggtggattccgccggagta
tggattccgtag
DBGET
integrated database retrieval system
