Lacrimispora sinapis: VIG27_11525
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Entry
VIG27_11525 CDS
T10884
Name
(GenBank) pectate lyase
Organism
lsia Lacrimispora sinapis
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
XIJ20167
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Position
2476975..2478546
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AA seq
523 aa
AA seq
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MTESGGWYESAYIKWKPVSNAASYNVYVKPASAGDSAYTLIDDMLIRKYPSYWRADAVGL
TPGQYVMKVEAVLSNGSKERAVSDPLSVIANDRSGFAFSSESTFGTGSGAYKDDGTLKDG
AQVIYITSDTAKKVTLDVIVNKSGKRQTATGIGEILALRQKGYDKTPLAIRFIGQLSRSD
MSGQLNSSGYLQVKGKSAYTEMNMTLEGIGEDATAYGWGILVRNCGNLEVRNLGIMLYPD
DGISLDTDNCNVWVHNNDIFYGTAGSDADQAKGDGSADVKKSSTYITFSYNHFWDSGKSS
LCGLKETEDFFVSYHHNWFDHSDSRHPRIRLGSIHIYNNYYDGNSKYGVGITTGGSAFVE
ANYFRNCKYPMMSSLQGTDALGEGTFSGEDGGIIKAFNNKIENANSLIYANSDDGTAKEN
KTSFDAYLASSRNETVPGSYKTLVGNKAYNNFDTRKDLGVSQSDIDDPNDVAQVVTSLSG
RMNKGDFTWKFNNASDDSSYDMNTGLMSKIRSYKTELVSIGGK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgacagaaagcggaggatggtatgaaagtgcttatatcaaatggaagcccgtcagcaat
gccgcttcttataatgtttatgtcaagcctgccagtgctggagattctgcctatacacta
atcgatgatatgctgataagaaaatatccctcatattggagagcggatgcggtaggtctt
acaccaggccaatatgtcatgaaagtggaagcagttctctccaacggttcaaaggaacgc
gctgtttcagacccactttccgtaattgcaaatgacagatccggatttgctttttccagt
gagtccacctttggcactggttccggtgcttataaggatgacggaaccttaaaagacggt
gcacaagtgatctacataacctctgacacagcaaaaaaagtgactttagacgttatcgta
aacaaatccggtaaacggcagacagcaaccggaatcggggagatcttagcgttacgtcaa
aaaggatatgacaaaactcctcttgcaatccgttttattggacagctctcccgcagtgac
atgtccggacagctaaacagcagcggatacctgcaggtaaaaggtaaatctgcctacacg
gaaatgaatatgaccctagaaggcattggagaagacgcaacggcctatggctggggcatc
ctggtcagaaactgcggaaatctggaagtccggaacttaggcattatgctgtatccggat
gatggtatttctcttgacacagataactgcaacgtctgggtacataacaatgatattttt
tacggaacagccgggtccgatgccgaccaggcaaaaggggatggttccgctgacgtaaaa
aaaagttccacttatatcacattctcttataaccatttctgggattccggtaaaagttcc
ctttgcggtttgaaagaaaccgaggatttttttgtctcttaccaccacaactggtttgat
cattctgactcccgtcatccgcggattcgattgggttccatacatatttacaacaactac
tacgacggaaattcaaaatacggtgtgggtatcacaaccggaggttctgcatttgtagaa
gctaactatttcagaaattgtaaatatccaatgatgagttccttacagggcactgacgct
ttgggcgagggtaccttctccggagaagatggcggaatcatcaaggcatttaataataaa
atcgaaaatgccaatagtctgatctatgcaaactcagacgatggaacagcaaaggaaaat
aaaacttcttttgatgcctatcttgcttcctcaagaaatgaaaccgtacctggttcttat
aagaccttagttggaaataaggcttataacaactttgatacacggaaagatctgggcgtc
agccaatctgacatagatgaccccaacgatgtggcccaagtggtaacttctctttccggg
cgtatgaacaagggagactttacctggaaattcaacaacgcttctgacgattcttcctat
gatatgaacaccggactgatgtctaaaattagaagctataaaacagagcttgtatcaatc
gggggaaagtaa
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