Lacrimispora sinapis: VIG27_11655
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Entry
VIG27_11655 CDS
T10884
Symbol
lsa(E)
Name
(GenBank) ABC-F type ribosomal protection protein Lsa(E)
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIG27_11655 (lsa(E))
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_11655 (lsa(E))
01504 Antimicrobial resistance genes [BR:
lsia01504
]
VIG27_11655 (lsa(E))
Transporters [BR:
lsia02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
VIG27_11655 (lsa(E))
Antimicrobial resistance genes [BR:
lsia01504
]
Gene variants
Macrolide resistance genes
Transporters
VIG27_11655 (lsa(E))
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
Dynamin_N
MMR_HSR1
AAA_15
KAP_NTPase
DUF5906
NB-ARC
MobB
AAA_23
Motif
Other DBs
NCBI-ProteinID:
XIJ20190
LinkDB
All DBs
Position
complement(2508100..2509584)
Genome browser
AA seq
494 aa
AA seq
DB search
MSLINVSNLTFSYEGSYDNIFENVSFQIDTDWKLGFIGRNGRGKTTFLNLLLGKYAYSGN
ISSTVKFEYFPYDVEDKSLYTIEVMKSICTECMDWEIFREISLLDVQEDALYRPFNTLSN
GEQTKVLLAALFLTASCFLLIDEPTNHLDIDARNVVQNYLKRKKGFILVSHDRSLLDQCV
DHILSINKTNIEIQKGNFTSWWENKTLQDNFELAENKKLLKEIGRLSYAAKRSSNWSNKV
EKSKYGTTNSGSKLDKGYVGHKAAKAMKRAKNIESRHQEAVLQKSELLHNIEQYDDLKIS
PLEFHKECLIEANDLSLSYGDKEVCSNLNFRVNIGDRVAIIGKNGSGKSSILKLINGDDI
KFTGNFMLASGLKISYISQDTSYLKGNLSEFAYNNKIDETLFKTILRKLDFNREQFDKNM
VDFSAGQKKKVLIAKSLCESAHLYIWDEPLNYIDIFSRIQIEKMILEYCPTLLFVEHDDA
FCNNICTKNINLGL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtccttaataaatgtttcaaatctaactttttcatatgaaggaagttatgacaatatt
tttgaaaatgtaagttttcagatagatacagattggaaactcggttttattggaagaaac
ggacgcggtaaaactactttcttaaatttactgcttggcaaatatgcgtattccggcaat
ataagttctacagttaagtttgagtattttccttatgatgtggaagataagagtctatat
acaattgaagtaatgaagagtatttgtacggaatgtatggattgggagatttttcgtgaa
atatcattgcttgatgttcaagaagatgctttatatcgtccgtttaatacattgtcaaat
ggtgagcaaacaaaggtccttcttgcagctttattccttacagcgagttgtttcctgctt
attgatgaacctacaaaccatcttgacatcgatgcacgtaatgtagtgcaaaactatttg
aaacgcaagaaggggtttattttggtatctcatgatagaagcttacttgatcaatgtgtt
gaccatatactatctatcaataaaacgaatatcgaaatccaaaagggaaattttacttct
tggtgggagaacaaaacgttacaagataattttgaactggcagaaaacaagaaactcctt
aaagaaataggaaggttgtcttatgcagcaaaacgtagttcaaactggtcaaataaagta
gaaaaaagtaaatatggaacaacaaattctggttcaaaactggataagggttatgttgga
cataaggctgcaaaagcgatgaaacgtgccaaaaatattgagtcaagacatcaggaagcc
gttttacaaaaatcagaactgctccacaacattgaacaatatgatgacttaaaaatttca
ccacttgaatttcacaaagagtgcttaatagaagcgaatgatttatcattgtcttatgga
gataaagaagtatgcagtaatcttaatttcagagtcaatattggtgatagagttgccatt
atcggaaaaaatgggagtggtaagtctagtatcctaaaattgattaatggagatgatatt
aaatttaccggaaattttatgctagcaagtggactaaaaatttcttatatttcgcaagat
acttcatatttaaaaggtaatctatctgaatttgcctataataataagatcgatgaaact
ctatttaaaacgattcttcgtaaactggattttaatagagagcagtttgataagaacatg
gtggattttagtgctggtcagaaaaagaaagtactaattgctaaaagcctttgtgaaagt
gcacatttgtatatatgggatgagccattgaactatattgatattttttcacgtatccaa
attgaaaaaatgattttggaatattgtcctacactattgtttgtggagcatgatgatgct
ttttgcaataatatttgtacgaaaaatattaatttaggtttgtag
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