Lacrimispora sinapis: VIG27_12510
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Entry
VIG27_12510 CDS
T10884
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lsia Lacrimispora sinapis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsia03400
]
VIG27_12510 (addA)
Enzymes [BR:
lsia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VIG27_12510 (addA)
DNA repair and recombination proteins [BR:
lsia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
VIG27_12510 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
ResIII
AAA_11
AAA_30
T3SS_CopN_3rd
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XIJ20340
LinkDB
All DBs
Position
complement(2683843..2687535)
Genome browser
AA seq
1230 aa
AA seq
DB search
MAISWTDEQKAVIESRNRNLLVSAAAGSGKTAVLVERIIRMITEGEEPVRIDQLLVMTFT
KAAADEMRERILKAVDEKLLEHPENSHLQMQAAMIPYAQITTIDSFCLGLIREHYNKLDI
DPAFRVGDEGELILLRADVMKEMLEEFYESGDPLFEQFVETYASGKTDHGIEDYIMQVYT
FSQSNPWPEEWLARCRDELSAGDMGQMMEMEWMKFLMRDVALQVSEFISQIQAAAEVCEE
ENGPLAYLPMLTSDLNLLNRILSAENYEALNEQLKSVSFDRLASIRSKDIDPEKKAYVTG
VRDRVKKAVGKLSELYCFESPDEVFSDILGTKEAVTMLLDLAGEYARRYQEKKKERNLVD
FNDLEHYALEILLKKEGDKRIPSDAADELSAQFIEILVDEYQDSNDVQEALINSISRERF
GTPNVFMVGDVKQSIYQFRLARPQLFLDKYESYQKEEGKYQKIELHQNFRSREEVLKSIN
EVFYQIMTKNLGNIRYTKEAALHPGAVFAPFEGRAGEKPELLMIHAEGNLLKQLDDDGGD
FTSRELEAKAIAARIREFVHPETGLYVWDKNLNGKGGYRIAGYGDMVILLRSLSGWAEDF
VNVLMNEGIPAYAERKTGYFTAVEVEIILSLLNIIDNPMQDIPLAAVLKSPIGQVTDEEM
AHMTARFKKTSKKGQDRGIYGAWQQYLKDYEGTQDPDYPGLYEKLVRFADRIDSYRAKAA
YLSIHELLYDLYEDTGYYDYVSAMPAGEVRRANLAMLVEKASAYEKTSYTGLFHFIRYIE
NLKKYDMDFGEASLAGEENTVRVMSIHKSKGLEFPVVFLAGMGKKFNKQDAYGKILIDPD
LGIGTDHLDLERRLKAPTLKKHVLKRKMELGAMGEELRVLYVAMTRAKEKLVMTGLDRYL
EKKMDRYAEVFRANGEIPFTILSTADSYLDWMIMSLSGKFSQIKIQSEGGQDTGSMVVRQ
LSVTELVGREVERQAGKKLTKERLLSLDTKQVYDEAFERELKAAFEYRYPYQADIGLHTK
LSVSELKKQGQFLDEEESEFLPTIPIFLKEEGTDEKGRGAFRGTAYHRILELLDFGSVQT
EEELQEAVERFRKEKRMDEESISLISKKLLLNFLKSPLGKRLSEAQREGRLKKEQQFVIG
IPAREMDIGDSDELILIQGIIDAYMEEEDGLVLVDYKTDHIKKGEEQVLIDRYRVQMEYY
TRALEQMTGKKVKEAVIYSLALQKEVRIRG
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggcaattagctggacggatgaacaaaaggcagtcattgaaagcaggaaccggaacctg
ctggtttcagcggcagcaggaagcggaaaaacggcagtgctggtggagcggattatccgc
atgatcaccgagggcgaagagcctgtaaggatcgaccagctccttgttatgacttttaca
aaagctgcggctgatgagatgcgggaacgtatcttaaaagcggtggatgaaaaactgctt
gaacatccggagaattctcatttacagatgcaggcggcaatgatcccctatgcccagatc
actaccattgacagcttttgcctgggcctgatcagagaacattacaacaagctggacatt
gacccggctttccgggtgggagatgaaggggagcttattcttttaagggcggatgtgatg
aaggagatgctagaggagttctatgaatcgggagaccctctttttgaacagttcgtggaa
acctatgcaagcgggaagacggatcatggaatcgaagattacatcatgcaggtatacacc
ttttcccaaagcaatccatggccggaggaatggctggcccggtgcagagacgagctttct
gccggtgatatggggcagatgatggagatggaatggatgaaattcctcatgcgcgatgta
gcccttcaggtttcagaatttatcagccagattcaggcggcggcagaggtctgtgaagag
gaaaacggccctctggcctatctccccatgctgacaagcgacttgaaccttttaaaccgg
attctttctgctgaaaattatgaagctcttaatgagcagctaaaatcagtatcctttgac
cgccttgcttccataagaagcaaggatattgatccggagaaaaaggcatacgtcacggga
gtcagagaccgggtaaaaaaagcggtgggaaagctgtcggagctttattgctttgaatcc
cctgacgaggtgttttctgatattttgggcactaaagaagcagttaccatgctccttgat
ctggccggagaatatgcaaggagatatcaggagaaaaaaaaggaaagaaatctggtggat
tttaatgatttagagcactatgccctggagatccttctgaaaaaggaaggggataagagg
attccgtcagatgcagccgatgaactgagtgcacagtttatagaaattcttgtggatgaa
taccaggacagcaatgatgtgcaggaggccctgatcaacagcatttccagagagcggttc
ggcactcccaacgtcttcatggtaggagatgtgaagcagagtatctaccagttccgtctg
gcaaggccccagctgtttttggataaatatgagtcttatcagaaagaagaaggaaagtat
cagaagattgagcttcatcagaattttaggagcagagaagaggttttaaaaagcatcaat
gaggtattttatcagatcatgacaaagaaccttggaaatatccggtatacaaaggaggca
gcgcttcaccccggcgccgtttttgctccttttgaaggccgtgcaggagaaaagccggag
cttcttatgattcatgcggagggaaatctgttaaagcagttagatgacgatggaggggat
tttaccagcagggaactggaggcaaaggccattgcggccagaatccgggagtttgtccat
ccggaaacaggtctttatgtgtgggacaaaaacttaaacggcaaaggcggctaccgaatt
gccggttacggggatatggtgattcttttacgaagcctaagcggctgggcagaggatttt
gtaaatgtgctgatgaatgaagggattcctgcctatgcggagagaaaaaccggatacttt
actgccgttgaggtggaaatcattctttcccttttaaatatcatcgacaatcccatgcag
gacatccctctggcagcagtgcttaaatctcccatcggccaggtaacggatgaggagatg
gcccatatgacggcacggtttaaaaagacatcaaaaaaaggccaggaccgggggatttat
ggagcatggcagcagtatttaaaggattatgagggcacacaggacccggattatccggga
ctttatgaaaaactggtacgttttgcagataggattgattcttacagggccaaagccgcc
tatctttccatacacgaactgctttatgatctatatgaagacaccgggtattatgattat
gtctccgccatgccagcgggagaggtccgcagggccaatctagctatgctggtggaaaaa
gcctccgcttatgaaaagaccagctataccgggctgttccactttatccgatacattgag
aacctgaaaaagtatgatatggattttggagaggcatctctggccggagaagagaatacg
gttcgggttatgagtattcataagagcaagggactggagtttcctgtggtattccttgca
ggaatgggaaagaagttcaacaagcaggatgcctacggaaagattttaatcgacccggat
ctgggaatcgggaccgatcatctggatctggaacggcgcttaaaggcacccacgttaaag
aaacatgtcttaaaacggaaaatggagctgggcgccatgggcgaagaactgcgtgtgctt
tatgtggcaatgaccagagccaaggaaaagctggtaatgacaggactggaccggtatctg
gaaaagaaaatggaccggtatgcagaggtgtttcgggcaaatggagagattccatttacc
attctctcgacggcggattcatatctggactggatgatcatgagcctttcggggaaattc
tcacaaattaagatccagtccgagggggggcaggatacaggaagtatggtggtccgccag
ctttccgttacggagcttgtgggaagggaggtggagcgccaggccgggaaaaagcttacc
aaggaacgtctgttatctctggatacaaaacaggtttatgatgaagcatttgaacgggag
ctgaaggcagcttttgaataccggtatccttatcaggccgacattggacttcataccaag
ctctccgtatcggaattaaaaaaacagggacagtttctggatgaggaggaaagtgagttc
cttcctaccattcctatattcttaaaagaagagggaacagatgaaaaaggccgaggggct
ttccgtggaaccgcttatcaccgtattctggagcttttggactttggctctgtccaaacg
gaagaagagcttcaagaggcggtagaacgtttccggaaagaaaaacgtatggatgaagag
agcatttcattaatctctaaaaagctgctgcttaatttcttaaaatccccacttggaaag
cgtctttctgaggcccagcgggagggacggttgaaaaaggaacagcagtttgtcattgga
ataccggcacgagagatggatattggagattccgatgaactgatattgattcagggtatc
attgatgcttatatggaagaagaggatgggcttgttctggtggattataagaccgaccac
atcaaaaagggagaagaacaggtgttgatcgaccgttaccgggtacagatggagtactat
acccgcgccctggagcagatgaccgggaaaaaggtaaaagaggcggtcatttattccctg
gctctccaaaaggaagtgcggatcagggggtaa
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