Lacrimispora sinapis: VIG27_12875
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Entry
VIG27_12875 CDS
T10884
Name
(GenBank) ABC-F family ATP-binding cassette domain-containing protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
lsia Lacrimispora sinapis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lsia03012
]
VIG27_12875
Translation factors [BR:
lsia03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
VIG27_12875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
nSTAND3
NB-ARC
AAA_28
NACHT
RsgA_GTPase
AAA
PduV-EutP
AAA_19
TsaE
AAA_18
ATP-synt_ab
AAA_7
AAA_30
AAA_14
ABC_tran_Xtn
DUF5906
Roc
AAA_24
AAA_16
PEPCK_ATP
nSTAND_NTPase5
AAA_15
TrwB_AAD_bind
ORC-CDC6-like
GTP_EFTU
RuvB_N
cobW
ATPase_2
Sigma54_activat
AAA_5
Zeta_toxin
AAA_23
DUF87
Motif
Other DBs
NCBI-ProteinID:
XIJ20411
LinkDB
All DBs
Position
complement(2760340..2762079)
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AA seq
579 aa
AA seq
DB search
MIKADNLSFSFPEKELYKNISFTLEEGQHCAFIGTSGSGKTTLTDMIMEPDRYMFDGTLK
IDPDYRIGYVSQFSQLDKTREITVFDYMAEEFIRLQNEITAICTEMETSEDIETLLVKYQ
AALDAFDAMGGDDYENNINKKLNLADLSKHETAMVSSLSGGEFKLIQVIKVMLSNPHLII
MDEPDAFLDFENINSLKNLINSHKGTLLIITHNRYLLDHCFDKILHLENKELQEFDGRFM
DYKLSLLQTKIELQELAAADTAEIERNKAIINKLRLAATFHTEASRGKSLHAREKVLERL
EARRIKAPFVVIRQPEIVLPDLPESEETTVLKVHDYSAAFDEVLLEHVSFEMKSTDKVAL
IGPNGTGKTTLLRDIYKNKTQSIQVGDQVKMAFLSQIQGEMLGEDHTVQDEFFEIGFNTY
DEIKAHIAKYGFGEEVLTQKIGNLSGGEKNLLQLAKVSVTKANLLLLDEPTSHLDTYSQL
ALEEAIDNYKGAVLMVSHDFNTIANCADYVLMVEDKNIRKISIRKFRKMIYASHFNKDYI
EIQDKKKSVETKIESALKKNDFELAKGLSEELERLIKLL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggcagacaacctttctttttcctttccggagaaggaactgtataaaaatatt
tcatttaccctggaagaggggcagcattgtgcgtttataggcacaagcggcagcggaaag
accaccttgacggatatgattatggagccggaccgctatatgttcgatgggaccctgaag
attgacccggattacaggatcggatatgtgagccagttttcccagctggacaaaaccagg
gaaattacggtctttgattatatggcagaagagttcatcaggcttcaaaatgagataact
gccatctgtacggaaatggaaacctctgaggatatagaaacgctgcttgtaaaataccag
gcagcattggatgcattcgacgctatgggcggtgatgattatgaaaataacatcaacaaa
aaactgaatctggcggatttgagcaaacatgaaacagccatggtctccagcttaagcgga
ggagaattcaagctgattcaggtcattaaggtaatgctttccaatcctcatctcatcatc
atggatgaaccggatgcatttttagattttgaaaatatcaattccttaaaaaatctgatc
aattcccacaaagggaccctgttaattatcactcataaccgctatttgctggatcattgc
tttgataagatccttcatctggaaaataaagaactgcaggagtttgacggaagatttatg
gattacaagctgtcattgctccagacaaagattgaattgcaggaacttgctgcggcggat
acggcagaaatcgaaagaaataaagccattatcaataaattaagacttgcagccaccttt
catacggaagcgtccagagggaaatccctgcacgccagagaaaaagttttagaaagactg
gaagcccgcagaataaaggccccatttgtggtgatccggcagccggaaatcgtcctgcct
gatctgccggaatccgaagagaccacggtattaaaggtccatgattactctgcggcgttt
gatgaggtccttttggaacatgtgagctttgagatgaaatcaacggataaagttgcctta
attggtcccaatggtacagggaaaaccacgctgctccgggacatttataaaaacaaaacc
cagtccatccaggtgggagaccaggttaaaatggcttttttgtcacagatccagggggaa
atgctgggcgaagatcatacggttcaggacgaattctttgaaattgggtttaacacctat
gatgaaatcaaggcgcatattgcaaaatatggtttcggtgaagaagtcctcacccagaaa
attggcaatctttccggaggagagaaaaacctgcttcaattagccaaggtatctgtcacc
aaagccaaccttctgcttcttgatgagccgaccagccacttggacacctattctcagctc
gctttggaagaggccatagacaactataagggtgctgttttaatggtgtcccatgatttt
aataccatagcaaactgtgcggattatgtgttgatggttgaagataagaacatccggaaa
ataagcataagaaaattcaggaagatgatctatgccagtcattttaataaagattacatt
gagattcaggacaagaaaaaatcagtggaaacaaagatagaatccgcgttaaagaagaat
gattttgaattggcaaaagggttatccgaagaactggaacggctgataaagttactataa
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