Lacrimispora sinapis: VIG27_13015
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Entry
VIG27_13015 CDS
T10884
Name
(GenBank) PrpR N-terminal domain-containing protein
Organism
lsia Lacrimispora sinapis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PrpR_N
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_50
PAS_9
PAS
PAS_4
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
XIJ20437
LinkDB
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Position
complement(2794982..2796892)
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AA seq
636 aa
AA seq
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MTEDRYRKEFIMGKTALLVSREEMLYQAHNILQEKKYEINEMKVIQTEDAVIQARQSIAN
GASIIIARGLQASLIKQYTDIPVVEIVITAQEMALLIIKAKQILKKETPVIGVVGFQNMF
CDMSYFDTIYDIDMRTYFAEKGDLLEDMAKQAVDDQVDLIIGGDTAVRIAGDEGIPSLFL
SNTEDSLRNAFSMAERVNYAMEIEKRNAAQIETLLDYSFQGVARLDASGTIMDINGVMED
ILGKEKDKVINLPAVAVFGELEEAPFRQVLEYGKESCSLFLQINRKSLFAVVAPVMIDGR
VEGAILTCQPMKKERFHRSTGGEKQEFKGFVALGEFEDILKESSKMQECVRLSKLYALSG
KAVAITGETGTEKRLLAQSIHNAGIYKEGPFVVLSCEGLEETVQFETIFGDKGAVVHAKG
GSLLLEEIECLTRANQYRLCQLIRYKNRMGSGAVSYPGTRVRVMTASRYSLPQLLQRGVL
SEELFYLLNGLTVKIPPLRERKEDLKQRLKACMESCSERYSAFHVLTKRAETLLLEYPWE
GNLYQVENFCERLILTANKRILDEDFVKQVLNELDPEQEIPDQEKEKADRKMKLPEEAGI
IEEALMRFAGNQEAAAKALGMSKTTLWRKRKKYHLD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagatagatatagaaaggaattcatcatgggaaagaccgcactgctcgtttcc
agggaggagatgctttatcaggctcataatatcctgcaggaaaaaaaatatgagatcaac
gaaatgaaagtcatacaaactgaagatgccgttatccaggcaaggcagtccatagctaat
ggtgcctccatcatcattgccagaggacttcaggcttccctgatcaagcagtatacggat
attccggtggtggaaatcgtcataaccgctcaggagatggcattgcttatcattaaggca
aagcagatcctaaaaaaggaaactcccgtcatcggtgtggtaggatttcagaatatgttc
tgtgatatgtcatactttgacaccatttatgacattgatatgcggacctattttgcggaa
aaaggggatttactggaggacatggcaaaacaggcggtagatgaccaggtggatttgatc
attggaggagatacggcagtaagaatcgctggggatgagggaattccatccttgttttta
tccaatacggaggattccttaagaaacgcattttctatggcggaacgtgtgaactatgcc
atggaaatcgaaaagcgcaatgcggcccagatcgaaacacttttggattattcctttcaa
ggagtggccaggctggatgcttcgggaactattatggatatcaatggggttatggaggat
attctggggaaagaaaaggataaggttatcaatctcccggccgttgcagtttttggggag
ctggaagaggcgccctttcgccaggtattggagtatggaaaggaatcctgttctttgttt
ctgcagattaaccgaaagtccttatttgctgtggtggcaccagtcatgattgacggacgg
gtggagggggcgatcttgacctgtcagcctatgaaaaaggaacgtttccataggagcact
ggcggagaaaagcaggaattcaaagggttcgtggcactgggagagtttgaggatatttta
aaggaatccagtaaaatgcaggaatgtgtccggctttccaagctgtacgccttgtccggg
aaggctgtggcgatcacaggagagaccggtacggaaaaaaggcttctggcccagagcatt
cacaatgccggcatttataaagaaggcccttttgtggtactgtcctgtgagggcttggaa
gaaacggttcagtttgaaactattttcggagataagggagcggttgtccatgcaaaggga
ggttctctgctgctggaggaaatcgagtgtctgaccagggccaaccaataccgtctgtgc
cagctcattcgctataagaaccggatgggcagcggtgctgtttcctatccgggaacccgt
gtgcgggtcatgactgcttccagatattctcttccccagctgcttcagcggggagtgttg
agtgaggaactgttttatctgttaaatggtctgaccgttaaaattccgcctttaagagag
cggaaggaggatttaaagcaaaggctgaaggcgtgtatggaatcgtgcagtgaacgctat
tccgcatttcatgtccttacaaagagggcggagacgctgctgttggagtatccatgggaa
gggaatctctatcaggtggaaaatttctgcgagcgcttaatccttacggccaacaaacgg
attttagacgaggactttgtaaagcaggttcttaatgagctggacccggagcaggagata
ccagaccaggaaaaagagaaggcagaccggaaaatgaagctgccggaagaagccggaatt
attgaagaggctctgatgcggtttgcaggaaaccaggaggcagcggcaaaagcattgggc
atgagcaaaaccaccctgtggcggaaacggaaaaagtaccatctggattga
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