Lacrimispora sinapis: VIG27_13930
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Entry
VIG27_13930 CDS
T10884
Name
(GenBank) cache domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02020
Two-component system
lsia02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VIG27_13930
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VIG27_13930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lsia02035
]
VIG27_13930
Bacterial motility proteins [BR:
lsia02035
]
Flagellar system
Chemotaxis proteins
MCPs
VIG27_13930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_2
MCPsignal
dCache_2
HAMP_2
ATG17_like
HAMP
HisKA
BORCS6
DUF948
Syntaxin
GvpG
DUF1664
Motif
Other DBs
NCBI-ProteinID:
XIJ20608
LinkDB
All DBs
Position
complement(2977903..2979642)
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AA seq
579 aa
AA seq
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MIKSKMHRLQVRGKLILFVSVMVFFTILALTSIFYVSLNRAYQNWINESYQSYDQKIKIA
VENMVSVLEVNYKRYENGEITEAEARKNAESLVRDSRYDNGNGYFWADTSKGICAVHRNP
EYEGKERYDDKDMAGNFYIRDLIKSGSKSGGGYTDFYFTKPGQDGVFAKRAYTLKFEPYD
WYISTGNYIDDIDRAVAEHQKEKMTEVVLLLAVAVAVCVVGLLILASVLHRITAPLTSIA
GRLKLLAEGDVQTPPVTISQTGDEMEVLSRATDELITEMREVVNDITRHMKSMSLGDMTL
PVDKVYAGDFAPIHDSLVLIYQQLNRTLLTISQSAEQVNAGSTQVADAAQALAAGATEQA
GTIEELSSSIAEVSDKVEQSAAHIEEATGYVEQTVMRVEESNARMQQMLSAMDEIKSASD
EIGKITKEVDAIASQTNLLALNAAVEAARAGEAGKGFAVVADEVRTLAANVAEAAKKTAE
LVENATHAVEGGLVIAKENAEILGEVTGQANQVKVLMENVERASREQAEAMNEVTYGIGQ
ISAVVQSNAATAEESSASSEELSAQANVLRNEVEKFKIV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatcgaaaatgcatcgattgcaggtaagaggaaagctgattttatttgtcagt
gttatggtattttttacaattcttgcgctgacatcaattttttacgtaagtttaaatcgt
gcatatcaaaactggattaatgaaagttatcaaagctatgaccagaagataaagatagca
gtcgaaaatatggtaagtgtgctggaagtcaattacaagcggtatgaaaatggagagatc
acagaagcagaagcccgaaaaaatgcggagagcctggttcgtgactccaggtatgacaac
ggaaacggctatttctgggcggatacttccaaaggcatttgtgcggtacataggaatccg
gaatatgaaggcaaggaacgctacgacgataaggatatggcaggaaacttttatatccgg
gatttgattaaaagcggctccaaatcaggaggcggatatacggacttttattttacaaaa
cccggacaggatggcgtatttgcaaaacgggcttatacccttaaatttgaaccctatgac
tggtacatcagcactggaaattatattgatgacatcgaccgggcggttgcagagcaccag
aaggagaaaatgacagaggtggtactgctcctggcggttgcggtcgctgtatgtgtggtg
ggacttttgatactcgcttccgtgctgcaccggatcaccgcccctctgacctctatcgcc
ggtcgtttaaagcttctggcggaaggagatgtgcagacaccccccgttaccatcagccag
accggggatgagatggaagtgttatcccgtgccaccgatgagcttataacagaaatgcga
gaagtggtcaatgatatcaccagacatatgaaaagcatgtcgctgggggatatgacactt
ccggtggataaggtttatgccggtgactttgcccccatccatgattccctggttttgatt
tatcagcagttaaataggacgctgctgaccatcagtcagtctgcggaacaggtcaatgcc
ggttccacccaggtggcagatgcagcacaggctctggcagcaggagcgacggagcaggca
ggcaccattgaagaactatcttcctccattgcggaagtttctgataaggtggaacagagt
gccgctcatattgaagaagcaaccggttatgtggaacaaaccgtaatgcgggtggaagaa
agcaatgccaggatgcagcagatgctaagtgcgatggatgaaatcaaaagcgcttctgac
gagatcggaaagatcacaaaagaggtggatgccattgcctcccagaccaatttactggcc
ttgaatgctgcagtggaagctgcacgtgccggtgaggcaggaaaaggctttgctgttgtg
gcagatgaagtgcgcacgcttgcagcaaatgtggccgaagccgcaaagaaaaccgcagaa
ttggttgaaaatgcaacccatgcagtggagggaggcttagtcattgccaaagaaaatgca
gagattcttggggaagtgaccggtcaggccaatcaggtaaaggtgcttatggaaaatgta
gagcgtgcgtccagagaacaggcagaggccatgaatgaagttacttatggaatcggtcag
atttccgctgtggtacaaagcaatgcagctacagcagaagaaagctctgcttccagtgag
gagctttccgcacaggccaatgttttacgaaatgaagttgaaaaatttaagattgtataa
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