Lacrimispora sinapis: VIG27_15105
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Entry
VIG27_15105 CDS
T10884
Name
(GenBank) ABC transporter substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
lsia Lacrimispora sinapis
Pathway
lsia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VIG27_15105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsia02000
]
VIG27_15105
Transporters [BR:
lsia02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
VIG27_15105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
XIJ20820
LinkDB
All DBs
Position
3237993..3239090
Genome browser
AA seq
365 aa
AA seq
DB search
MKKSLLRILAFGTLTVLSLSLLSGCGKQSSKAGSAGEVYVYNWGEYIDESVIEQFEKETG
IKVIYDLFETNEEMYPVIEAGGVKYDAVCPSDYMIQKMAENNLLSEINFDNVPNIKEIDP
KYMEMSKSFDPENKYSVPYCWGTVGILYNTSMVDPKDVPTKWSDLWDEKFKDNILMQDSV
RDAFMVALKSLGYSMNTTNEAEIQEARDLLIKQKPLVQAYVIDQVRDKMIGGEAALGVIY
SGEMLYIQNEVKDLNLDYSLEYVIPEEGTNLWLDSWVIPANAPNKENAEKWINFLSRPDI
AKKNFDYITYPTPNKGAFDLLDPEIKNNKALFPDENMLKTSEVYKYLGDEVDSLYNEAWK
EVKSN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtctattgagaattctcgcatttggtaccttgaccgttctctccctctct
ctgctgagcggctgcgggaaacaaagctccaaagcaggaagtgccggagaagtttatgtt
tacaactggggcgaatacattgatgaatccgtcatcgaacaatttgaaaaagaaaccgga
atcaaggtcatctatgacttatttgagaccaatgaagagatgtacccggtcattgaagcg
ggcggcgtaaaatacgatgcggtctgcccttccgactatatgatccagaagatggcggaa
aacaatcttctgtctgagatcaattttgacaacgttccaaacatcaaggagattgaccct
aaatacatggagatgtccaaaagctttgacccggaaaacaaatattccgttccttactgc
tgggggaccgtagggattctctataacaccagcatggtagacccaaaagatgtacctacc
aaatggtctgatttatgggatgagaaattcaaagacaacattctgatgcaggacagcgtc
cgggatgccttcatggtggctttaaagtccctgggatactctatgaacaccaccaatgaa
gcggagatacaggaagcaagggatttgctgatcaagcagaaaccgctggtacaggcttat
gtcattgaccaggtacgggataagatgatcggcggcgaggctgcattaggcgtgatctac
tccggggaaatgctttatatccagaatgaagtaaaggatttaaaccttgattattcctta
gagtatgtgattccggaggaaggaaccaacctctggctggactcctgggtcattcctgcc
aatgctcccaacaaagagaatgcggaaaaatggatcaacttcctgagccgccctgatatc
gcaaagaagaactttgattacatcacctatccgactccaaacaaaggggcctttgacctt
cttgatccggaaataaagaacaataaagctctgttcccggatgagaacatgttaaagacc
agcgaggtttacaagtatcttggggatgaagtggattccctttataatgaagcgtggaaa
gaagtaaaatccaattaa
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