Lacrimispora sinapis: VIG27_15255
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Entry
VIG27_15255 CDS
T10884
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
lsia Lacrimispora sinapis
Pathway
lsia00520
Amino sugar and nucleotide sugar metabolism
lsia01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
VIG27_15255
Enzymes [BR:
lsia01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
VIG27_15255
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
PLL
Motif
Other DBs
NCBI-ProteinID:
XIJ20850
LinkDB
All DBs
Position
complement(3268280..3269914)
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AA seq
544 aa
AA seq
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MIKNPILPGFNPDPCICRKGEDYYLAVSSFEWLPGIPVYHSKDLKHWELYTHVLTDDTAV
DLKKLPSSKGIWAPCLSWCEEEDLFYVVYGVMNSMNARYFDVDNFLITAKDIKGPWSEPV
YIHSSGFDASIFHDDDGKKYIVSLEWETREGYEKPGAICMVEYSPQEKKIVGFPKRIYNG
GTDRGCIEAPHLYRRGKYYYLMCAEGGTGYNHCVTMGRSQSVFGPYEADPGNPIVTSAPG
NSNERHNPDHLKPEYYNPDSILQKSGHGSLIETQTGEAYLVHLCARPFVPELRCTLGRET
SIQKMEWTKEGWLRMKGGGNLARLETEESGLPKTRFPQLPERDDFDSGQLGIQYYAPRIM
PERFADVHVRKGYVRIRGQESRTSLNRVSILARKLTSVHARITTKMEFVPLVHQHSAGLI
LYYDNMNYINLRKYYSETLNHSALSVIHLENGEKTEFLNTRIPVKDVPVWLRLEINGRES
YFSWSYDGMEYKRIGRIFDTTRFSDEYCHYGEFTGTMVGLTCADRVRHEHYADFDFFEYQ
TLPV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaatccgattttgcccggttttaatccagatccctgtatatgcagaaagggg
gaagattattatctggcagtatccagctttgaatggcttcccggaattccggtttatcat
tcaaaggatttaaagcattgggaactttacacccatgtgctgactgatgatacggcggtg
gatctaaaaaaactcccctcttccaagggaatctgggcaccgtgtctttcctggtgtgag
gaagaggatttgttctatgtggtttatggtgtgatgaactccatgaatgccagatatttt
gacgtagacaactttctgattaccgcaaaggatatcaaagggccatggagcgagccggtc
tacattcattcctccgggttcgatgcctccatttttcacgacgatgacggaaaaaaatac
attgtttctctggaatgggagacccgggaaggatatgaaaagcccggggcgatctgtatg
gtggaatatagtccgcaggaaaagaagatcgtgggatttcccaaacggatttacaacggg
ggaacggacagagggtgtatcgaagcacctcatctgtaccgccgggggaaatattattat
ctcatgtgtgcggagggaggaaccggatataaccactgtgtgaccatggggaggtctcaa
tcggtcttcggtccttatgaagcggacccgggaaaccccattgtcacatcggcaccaggc
aattccaacgagcggcataatcccgatcatttgaagccggagtactataatcccgattcg
attcttcaaaagtccggtcacgggagtttaatagaaacccagacaggagaggcttatctg
gtgcacttatgcgccagaccctttgtgcccgagcttcgctgtaccttaggccgggaaact
tccatccagaagatggagtggacaaaggagggctggctgcgcatgaaaggcggcggcaat
ctggccaggcttgaaacggaggagagtggtctgccaaagacccgttttccgcagcttccg
gagcgggatgattttgacagcgggcagttgggaatacaatactacgccccccgcatcatg
ccggagcgctttgcggatgttcacgtaagaaaagggtatgtaagaatccgggggcaggaa
tccaggacctctttgaatcgagtcagtattcttgccagaaagcttacctctgtacacgca
aggatcacgactaaaatggaatttgttcccctggtgcatcagcacagtgcaggactgatt
ctttattatgataacatgaactatatcaatctccgcaagtattacagtgaaacattaaac
cacagtgctttatccgtgatccatctggaaaatggcgaaaaaacggaatttttaaatacc
aggattccggtaaaggacgttcccgtctggctgcgccttgaaatcaatggaagagaatct
tatttttcctggagctatgatgggatggaatataagagaatcggaagaatttttgacacc
acccggttttccgatgagtattgccattatggagaatttaccggtacaatggtgggactg
acctgtgcagaccgcgtcagacatgagcattatgcagatttcgatttttttgaatatcaa
acgcttcctgtctga
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