Lacrimispora sinapis: VIG27_16590
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Entry
VIG27_16590 CDS
T10884
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lsia Lacrimispora sinapis
Brite
KEGG Orthology (KO) [BR:
lsia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsia03032
]
VIG27_16590
03036 Chromosome and associated proteins [BR:
lsia03036
]
VIG27_16590
03400 DNA repair and recombination proteins [BR:
lsia03400
]
VIG27_16590
DNA replication proteins [BR:
lsia03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VIG27_16590
Chromosome and associated proteins [BR:
lsia03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VIG27_16590
DNA repair and recombination proteins [BR:
lsia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VIG27_16590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-DNA_bdg
TFIIB
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
XIJ21095
LinkDB
All DBs
Position
complement(3531398..3531700)
Genome browser
AA seq
100 aa
AA seq
DB search
MLHFRRKISMNKAELIAAVAEKAELSKKDAEKAVKALTDVVSEELVKGEKIQLVGFGTFE
VSERAAREGRNPKSGEVMNIPASKTPKFKAGKALKDMVNA
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gtgctacatttcaggaggaagatatcaatgaacaaagcagagttaatcgcagcagtagca
gagaaggcggagctgtctaagaaggatgcggagaaggcagtaaaggctttgacagatgtt
gtatctgaagagttagtaaagggcgagaaaatccagttagttggttttggtacattcgag
gtatctgaaagagctgcaagagaaggcagaaatccaaagagcggcgaggttatgaacatt
cctgcttccaagactccaaaatttaaagctggtaaggctttaaaggatatggtaaacgca
taa
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