Leptidea sinapis (Wood White): 126964634
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Entry
126964634 CDS
T09272
Name
(RefSeq) receptor-mediated endocytosis protein 6 homolog
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126964634
Membrane trafficking [BR:
lsin04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
126964634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
G_path_suppress
Motif
Other DBs
NCBI-GeneID:
126964634
NCBI-ProteinID:
XP_050663816
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All DBs
Position
5:3334111..3383065
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AA seq
1616 aa
AA seq
DB search
MMQPSTEGGLNIAELANRLRREKIFINSERQLIQTLNEELEKTTLELLQASWICTQERQN
LTNLITSRSDAESIAACQRASLLEGSTFVDAFKVFKYKEASAVGELLGWLRETPHLMALC
LTLGEDHAPPNLTSSLVAGLYGSCRSPDDRTRLLAVIRSLIKYQMVPSPDPRKLFRTNKN
SLSSLFAVYRDGHTPARQFLVAALQAPVMAVLHEDEFFLDIDPDKAMERFSASDRLKKFG
QANSTEYSAKVARYRKWTVQSLYNLTTKFISALRECWPTFPTTIAWIVQQIVHLLKKHSR
SSEREVHAICTDLVLNQFICAAIVNPEAHGIIEIPVSYIARFNLIQIAQIIQMLCLARYQ
EVEPKVRDLYTKFERSCVWSLVEAVTSPQLGAAPAPPAGDAPLRTDVRNNTPVALFTRAD
LRALMTYLRRISSKLNNNTANGSSDEGQNGTVPTTNDLVNFGDTDTSASREVVDPSRNLE
RSDSTEGGEGVERLAALLQTLEPNYKARLHDLLRKVGDLSTVKTSPDNREIENCQAKRSL
LAKVPKPRMARGNGSEERVEKEHLEPPEVLIIKLANVDEQDYLGLVPESKVLECYYGGSE
AGDTEDPAALTPGPPAPVQKRTRFSVFHDEVSLGNTSDNLEAVSEAASNHSVTSSLELET
EDQNDNLSDMVSANVSGRGSPNISGRETPSSQVTDGDAAGDQPVRRLSQNAPGSQATRAA
QVKLLNQTRNEIDDKFCKFEIKKLLEGDETISIMSDTWSTDVLASDSETIGDTCDHANSH
ANTGSTVNNTNAPDVSETASESAWSIDVLASDSDRNTEVDTDDCVSVAARSDTSASWPHS
AHAPAPTRAVQNGQAKRPEVNSPRHTPRFGMPNRYGGVYQSATATLSRGGELDLPSHSHA
HHYSIENRKSILVNGYPVMTCYATSAPESPSTAPPMANDVFDYEPQKNSEAPPEGTVEAP
GDAAVEGEGEADEQVATTSAGADATSQWVDDSFPRHDGCVANKYSADKGYEEHDMDRSLN
SSESSLNAMSVSQYGRFEPGVEPPRPEPERSAIENLMTRMSAATISSNIVNNITSRIVKS
ELRTSVVNISSSRVDRKRDSSNVSLSTLSMTSETSASDRSSSQEVISDNVTERRISPPPK
PSTGAIPKSISFDTTAEKSQRRRIVGEDGLVGNLDELKNNVKRSGGNLLHKIKMFRQKGR
SHQQNDIKVCEEESPRCGEERVLEVAAGESSEEILAKYRRHSDGKTRQIVRRVSDLPDLE
LDRCEGVVDLNDPEQFNIMKRRLRTVLSSTDFHYVEYVPNRCTVSSLAEWIRAGNCPEAA
ATARALASAGTRAARLAAALRADLAARRPYAAYLASCRATLHHRRHELLVQLKQVRREYS
ECVRAAAAARVLDQLERGPALRRLTRQHHRTHDGGELMDERASRLTSSIRAVTAEVRADA
GWEAASRTALDAADLAVERAVYARLYLHVLFPNGDGDISRDQVLSDHIRRLSACTSASRA
GVSPGHLWAAPFPHAQLLLRQLPVYRTPRDKVSCVMRCVSSLMSVLSLTDGTPPAADDLT
PALVLVIIKVNPPSLLSTIELVNALAGAVLAGEALYWWTQFCAAVAYIKSMEYRDT
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaccatcaactgaaggtggtttgaacatcgctgaattagcgaatcgattacga
agggagaaaatattcattaattccgagcgacaattaatccaaacacttaatgaggagctg
gagaaaactactcttgaacttctgcaggcttcttggatatgcactcaggagcgtcagaat
ctcaccaacttgataacttcaagatctgatgcagagtctatagctgcttgtcaacgagcc
agtcttcttgaaggctctacattcgttgatgcttttaaggtgttcaagtacaaagaggct
tcagctgttggtgaattgctaggatggcttcgagagacaccacacctaatggccctgtgc
ctcacactgggggaagaccatgctccgcccaacttgacctcttctttggtagcaggttta
tatggtagctgtcgatcacctgatgacagaactcgcctactagctgttatacgatccttg
atcaagtaccagatggtgcctagtccagacccgagaaagttgttccgaacaaataagaat
tctctttcgtccttgttcgccgtatatcgagacggtcatacgccagcacgccagttcctc
gtagcggcgctgcaagcccccgtcatggcggtattgcacgaggacgagttcttcctagat
atcgacccggacaaggctatggagaggttctcagcgtcagatcgcttaaagaaattcggg
caggcgaacagcaccgagtacagcgcgaaggttgctcgctaccggaagtggactgtgcag
tcgttgtacaacctcaccaccaagttcatatcggcactgagggagtgttggccaaccttc
cccaccacgatcgcctggatcgtacagcagattgtgcatctcttaaaaaaacattccagg
agcagtgaacgtgaagtgcacgccatctgtaccgacctcgtgctgaaccagttcatatgc
gcggccatcgtgaaccctgaggcccacggcatcatcgagatcccggtctcgtacatcgcc
cgcttcaacctcatacagatcgcgcagatcatacagatgctctgtctggccagatatcag
gaggtggagccaaaggtgcgcgatttgtacacaaaattcgagcgatcctgcgtctggtca
ctggtagaggcggtgactagtcctcagctgggtgctgctcccgctccgcccgccggcgac
gctccactgaggaccgacgtacggaacaacacgcccgtggcgctcttcacacgcgcggac
ctgcgggcattaatgacatatttgcgtcggatatcgtcaaagttgaacaacaacacggcc
aacggctcgagtgatgaaggacagaatggaactgttcccacaaccaatgatctggttaac
tttggggatacagatacttctgccagtagagaggtggtggacccctcaaggaatctggaa
cgcagtgacagtacggaaggaggcgagggtgtggagaggctggcagcgctgctccagacc
ttggagcccaactacaaagcaagactccatgatcttctgcggaaagttggcgacctgagc
actgtcaagacatcgcctgacaaccgagagattgagaactgtcaagcgaagcgcagtctg
ctcgccaaggtgcccaagcccagaatggcgaggggcaatgggtcagaggagagggtggag
aaagaacacctggaaccacccgaggtgctcatcataaagcttgccaacgttgatgagcag
gattatcttggcctggtgccggagtccaaagtgttggaatgctactacggagggtcggag
gcgggcgacaccgaggacccggcagctctgactccgggcccgccggcccctgtgcagaaa
cgtaccaggttctcggtgttccacgacgaggtgtcgctgggcaacacgtccgacaacctg
gaggcggtgtcggaggccgcttccaaccacagcgtcacgtcaagcctcgagctggagacg
gaggaccagaacgacaacctatccgacatggtttcggcaaacgttagcggtcgcggcagc
cctaacatatcgggccgagagacgccgtcctcgcaggtgaccgatggtgacgctgcaggt
gatcaacctgtccgacgactttcacaaaatgcgccggggagccaagccacgcgggcagcg
caggtcaaactgttgaaccagacgcgcaacgagattgacgataagttctgcaagtttgag
atcaagaagctgcttgaaggcgacgagactatcagcataatgtctgacacgtggagcacg
gatgtgctcgccagcgactccgaaaccatcggcgatacgtgcgatcacgccaactcgcac
gcaaacactggttcgacggtgaacaacacgaacgcgcccgacgtgtcggagactgcgagc
gagtccgcgtggagcatcgacgtgctggcgtccgacagcgaccgtaacactgaggtggat
acggacgattgcgtgtcagtggcggcacgctccgacacgtctgcgtcgtggccgcacagc
gcgcacgcaccggctcctactcgcgccgtacagaacggacaagcaaaaaggcctgaagtc
aacagcccgcgacacacgcctcgttttggaatgcctaacagatacgggggcgtataccag
agcgcgaccgcgacactgtcccgcggcggcgaactcgatctgccgtctcactcgcacgcg
caccattactcaatagagaacaggaagagtatactcgtcaacggatatccggtgatgacg
tgttacgccacgtcagctccggagagccccagtacggcgccgcctatggccaacgacgtg
tttgactacgagccgcaaaagaatagtgaggctccgccggaaggcacggtagaggctcca
ggagatgctgcggtggagggtgaaggtgaggcggacgagcaggtggccacgacgagcgct
ggcgccgacgccaccagccagtgggtggacgacagcttcccgcgacatgatggctgcgtc
gccaacaagtacagcgccgacaagggttatgaggaacacgatatggacaggtcacttaac
tcgagcgagagttccctcaacgccatgtcggtgtcgcagtacggacgcttcgaacccggc
gtggagccgccgaggccggagcccgagcgctccgctatcgagaatctgatgacgcgtatg
tcagccgcgaccatctcctccaatatcgtgaacaatatcacgtcgcggatcgtcaagtca
gagctgcggactagtgttgtcaacataagctcgtcgcgagtggatcgcaagcgggattcc
agcaacgtctcgttgagcaccctgtcgatgaccagcgagacgtcggcgtccgaccgcagc
tccagccaggaggtgatcagcgacaacgtgacggagagaaggatcagcccgccgcccaaa
ccctcaaccggcgccatacccaagagtatcagcttcgacacaacagccgagaaatcgcag
agaagacgaatagtgggagaggatggcctggtgggaaacctggacgagctgaagaacaac
gtgaaacgctccggtggcaacctgctgcataagatcaagatgttccgccagaagggacgc
tcgcatcaacagaacgatatcaaagtatgtgaggaagagtcaccgcggtgcggggaagaa
cgtgtattggaggtggctgctggagagagctcggaagagattcttgccaagtaccggcgt
cacagcgacggaaaaacgcgccagattgtacgccgagtctctgacctgcccgacctggaa
ctagacagatgcgagggcgtggtggacctcaatgatcctgaacagttcaacatcatgaaa
cgcagactacgcactgtgctctccagcaccgacttccactacgttgaatacgtgcctaac
cgttgcactgtatcgtcgctagccgagtggatccgcgcgggtaactgtcccgaagccgcg
gcgaccgctcgcgccctggcgtctgcgggcacgcgggcggcgcgactcgcggcggcgctg
cgggcagatctagcggcgcggagaccatacgcggcctacctggcctcgtgtcgcgccacg
ctgcaccacaggcgacacgagctcctggttcagctgaaacaagtgcgtcgcgaatacagc
gagtgcgtgcgcgcggcggcggccgctcgcgtgttggaccagttggagcgcggtccggcg
ctgcggcgactcacgcggcagcaccatcgcacgcacgacggcggagagctgatggacgag
cgtgccagccggctgacgagcagtatccgcgcggtgacggccgaggtgcgcgccgacgcg
ggctgggaggcggcctcgcgcacggcgctggacgccgccgacctggccgtggagcgcgcg
gtgtacgcccgcctctacctgcacgtgctcttccccaacggcgacggcgacatctcgcgc
gaccaagtgctcagtgaccacattcgtcgactgtcggcgtgcacgagtgcgagccgtgca
ggtgtatcacccggtcatctttgggctgcgcccttcccgcatgcgcagcttctactccgt
cagctgccggtctaccgcacccctagggacaaggtgtcgtgcgtgatgcgctgcgtgtcg
tccctcatgtcggtgctgtcgttgacggatggaaccccgcccgccgccgacgatctcacc
cccgctcttgtgttggttatcatcaaggtgaaccccccgtcgctgctgtccaccatcgag
ctggtgaacgcgctggccggtgcagtgctagctggtgaggcgttgtactggtggacgcag
ttctgtgccgccgtagcctacatcaagagcatggagtacagggacacgtag
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