KEGG   Leptidea sinapis (Wood White): 126964852
Entry
126964852         CDS       T09272                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1 isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03030  DNA replication
lsin03410  Base excision repair
lsin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126964852
   03410 Base excision repair
    126964852
   03420 Nucleotide excision repair
    126964852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsin03032]
    126964852
   03400 DNA repair and recombination proteins [BR:lsin03400]
    126964852
Enzymes [BR:lsin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     126964852
DNA replication proteins [BR:lsin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    126964852
DNA repair and recombination proteins [BR:lsin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      126964852
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2 CAP-like_CFAP184
Other DBs
NCBI-GeneID: 126964852
NCBI-ProteinID: XP_050664127
LinkDB
Position
6:complement(1898569..1952593)
AA seq 2246 aa
MVLQNTGKFRVDKNDPNKKDAAGTSSGSREDSSESRIRAALENDRIDSKYGFDRVRDMKE
RTGFLLNMHMAEVLDEDKRLVAAMDYYFIEMDGSRFKVSLTFQPYFFILARKECEQEVMQ
YLSKKYVGTIHKMDVIEKEDLDLLNHLSGLKQCYIKLSFMSQNDMMKVRREILTAVNKNK
EREKKDAIYAEMLTNALTSNAAIEHAKKTTDHMENILDIREHDVPYHVRVSIDLKIFCGT
WYTVKSRGTETPIFTKRDDLLERPDPIVLAFDIETTKLPLKFPDSQTDQIMMISYMIDSQ
GYLITNREIISTDVEDFEYTPKPEFEGQFIIFNEQNELALIQKFFDHIMDVKPHIFVTYN
GDFFDWPFVEARAAILGLDMKQEIGFSKMNARDGTYACRPAMHMDCLCWVKRDSYLPVGS
QGLKAVAKAKLRYDPVELDPEDMCRMAAEQPQVLSNYSVSDAVATYYLYMKYVHPFIFAL
CTIIPLEPDEVLRKGSGTLCESLLMVEAFHANIVFPNKQVEELNKLTSDGHVLETETYVG
GHVEALESGVFRADIKCKFRIVPSAVDKLIESTEKTMKHAIEVEEGVPLELVTNFDEVCE
DIKSKLQHMRDHPRREENPLIYHLDVGAMYPNIILTNRLQPSAMVNASTCAVCEYNKPDA
CCQRHMDWMWRGDYLPATRSEYQRIQQQLETEKFPPLHPGGPTRAFHSLPKEEQAAYEKK
RLADYCRVAYKKTKVTRTEVRTTTICQKENSFYVDTVRAFRDRRYEYKALNKQAKALVAR
AIAGGDAAEIKSAKSREVLFDSLQLAHKCILNSFYGYVMRRGARWHSMEMAGIVCYTGAN
IIMRAREIIEQVGRPLELDTDGIWCILPASFPENVTVLTTHDKKKKINVSYPNAVLNSMV
KDYFTNDQYFELVDPTEKKYEQRSENSIFFEVDGPYLGMVLPASKEEGKKLKKRYAVFNF
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNDLKSCYSAVARVADYWLDVLYSKG
SNMPDSELFELISENRSMSKKLEDYGGQKSTSISTAKRLAEFLGDQMVKDAGLACKFIIS
RKPDGAPVTERAIPLAIFQSPAAVKRHHLRRWLKDNTISEDIDIRDVLDWAYYIERLSGA
IQKIITIPAALQGLENPVPRVQYPDWLHKKMMAKSDKFKTRKITDMFSAKPKEVKEVDSD
DEGDVAEDAAVMDTDKNLLMDMEDIGKEGSSKDIRPVVHKVKRKREQSPAKEFATWREAL
GAPPPFGTTKEEHLAWIVFQKKKWMWQMEQRGLRNRSKKGRLDKDAALPKNVGSTNTLGG
FIKRAQRTLLNTPWQIIQGQTLCPALRLSRIIPQMSETAEAGLFRVWALVGSELHQIKLS
VPRIFYVNRRVPLATDSGEYWRRVSRVLPRARPAMHLYQYTVPERLYRERSQELMSELSA
PEIEGIYETQMSLEFRVLVKLGCVCAVDPQEARKLIQFGSNNMDTFTINQLLFKGVAHEP
YLQRKDGVSPVKHIFLYQHSTPNSSRSMWAMIMGPIKRAYIFVQDSVKTNQVPNMNTLYS
AERIAKINLGTDETILPSAELHWEVSVETDSRAVYRGIQRALQRYRDEKCGPTMLALQST
LSSAALLALMPVLSEFPLVPLHVRDVESLYSTLEWQRIGARAIVRHYLNLDSVLTLTIKQ
CRYLGIPVGNMPADPTLFGADLFYARHLLKHNFVLWCSSLERPDLGGREIDDNRLVSETD
DSSRCVHNASGAYGGVCVSLETDALCVCALLQAHHILQVEGTSVATSFGAQHANIQDVMA
NTGSNATLNYDETAQCSAAFKVLRTMIAAWLRDVTVYKNVFADFQISHFYRWLKTPTSLL
YDPALRRTLYSLMKRLFLMLVAEFRRLGSQIVYADFNKIILHTNKSNVMDGIGYVEFVVQ
SIRNKELFHGIDIRYKECWSHLLWLDQANFAGIQGKLPEGLVEVGSSQVAQSTEESSEDE
GAISMQWNLATYLGRGVQQHFYTAAAGFLSAAHAEPDRLRELLAGEISQKLFQITEKIKN
RMPTLRLTDIGPQPGFKAEVLEGTTPALLFVNAVCKVFSLDESLAEQVTLLRRNLLRLIG
VGEFSPLAEWRDACASCVLCEVICKACNHCRDLDLCLTTDTALQNNVPVCLCPTCGTAYE
NQELEWRLIEILNRRAMSYTLQDLICTRCNQVKRENLSIVCDCAGEFKLMLPIKEIKSQL
ATFKTIAEYYRMPLLSENIEFNLSNM
NT seq 6741 nt   +upstreamnt  +downstreamnt
atggttcttcaaaacacaggaaagtttagagttgacaagaatgatccaaataagaaagat
gcagcgggaacatcaagtggatcgcgggaagattcatcagagtctcgtattcgtgctgcc
ttagaaaatgacagaattgattccaaatatggttttgatagagtaagagatatgaaagaa
cggacaggttttcttctaaatatgcatatggctgaagtgttagatgaagataagaggtta
gttgctgctatggattattactttatagaaatggatggctctaggtttaaagtatcacta
acattccaaccgtatttctttatattggcccgaaaggaatgtgagcaagaagtaatgcaa
tatttatctaaaaagtatgtgggaactattcacaaaatggatgtcattgaaaaggaagac
ttggatttgctcaatcatctctctggattaaaacaatgttacattaaactttcattcatg
tctcaaaatgatatgatgaaagtgagaagagagattctaacagcagttaataaaaacaaa
gagagggagaagaaggatgcaatttatgcagaaatgttaacaaatgcgctgactagtaat
gccgctattgaacatgcaaagaagacaactgatcatatggaaaatattttggacataagg
gaacatgatgtaccttaccacgtaagagtttcgatagacttgaaaatattctgtggtacc
tggtacactgtcaaatccagaggaactgaaaccccaatattcacaaagagggatgattta
cttgagagaccggatcccattgttctagcatttgatatagagacaactaaacttccactc
aaattcccagattctcagactgatcaaataatgatgatctcatacatgatagatagtcaa
ggatatctcattacaaatagggagattatttctaccgatgttgaagactttgaatacaca
cccaagccagaatttgaaggacaatttattatatttaatgagcaaaatgagcttgcatta
atacagaagtttttcgatcacataatggatgtgaagccccacatttttgtcacatacaat
ggtgatttcttcgattggccatttgtcgaagcacgcgctgcgatactggggctagatatg
aaacaagagattgggttcagcaagatgaatgcaagagacggaacctatgcttgtagacct
gcaatgcatatggactgtctatgttgggtcaaacgtgactcctatctgcctgttggttca
caaggcttgaaagctgtagctaaagctaagttgcggtatgatccagtcgagctagatcct
gaggacatgtgcagaatggctgcggagcaaccacaggtcttatcaaactactctgtatct
gatgctgttgctacttattacttatacatgaagtatgtccatccgttcatatttgctttg
tgtaccattattccattggagccggatgaggtgttgcgtaaaggctcgggtacactatgc
gagtcgctacttatggtggaggcattccacgcgaatatcgtcttcccgaacaaacaggtc
gaggagctgaataagctgacgtccgatggccacgtgttggaaacagaaacctatgtggga
ggacatgtggaagcactggagtctggtgtattcagagcggatataaaatgcaaattccgt
atagtaccatcggctgttgataaactgatagaaagcactgaaaagactatgaaacacgct
atagaggttgaagaaggtgtaccgcttgaacttgtgacaaatttcgacgaggtttgtgaa
gatatcaagtcgaaattgcaacacatgcgtgaccatcccaggcgggaagaaaacccactt
atataccatttggatgttggtgctatgtatccgaatattatattaacaaacagattgcag
ccgtccgccatggtcaatgcgagcacatgcgccgtatgcgagtacaacaagccggacgcg
tgctgccagcggcacatggactggatgtggagaggggactacctgccagcgacgcgaagt
gaataccagaggatccagcaacagttggagacagagaaatttcctccactgcatcccgga
ggacccacaagagctttccactctctaccaaaagaggaacaggcagcctacgaaaagaag
cggcttgcggactactgtagggtcgcatacaagaagactaaggtgacacggactgaggtg
cgaaccacaactatatgtcagaaagagaactccttctacgtcgatactgtcagggcattc
agagatcgtcgctacgagtacaaagcgttgaataagcaagctaaagcactggtggcgcgt
gccatagccggcggagacgcggccgagatcaagtccgctaagagccgcgaggtgctgttc
gactctctacaactggcacacaaatgtatcctcaactcgttctacggctatgttatgagg
cgcggcgcccgctggcacagcatggagatggccggcatcgtgtgttacacgggcgccaat
atcatcatgagggcgcgggagatcatcgagcaagtgggccgcccgctagagttagacacg
gacggtatctggtgtatactgcctgcatcattcccggagaacgtgacagtactgaccact
catgacaagaagaagaaaatcaatgtgtcttatcctaacgctgtgctaaactctatggtc
aaggattacttcaccaatgaccagtactttgagctcgtagacccgactgagaagaaatac
gagcagcgttccgaaaactcgatattcttcgaggtggacgggccctacctcgggatggtt
ctgccggcctccaaagaagagggcaagaaactgaagaaacgttatgccgtgttcaatttt
gacggctccttggctgagctgaaaggttttgaggttaaacgacgcggtgaactgcagtta
atcaagatcttccaatcgtcagtgttcgaagcgtttctgaagggaaacgacctaaagtcg
tgctacagcgccgtcgcccgggtggctgactactggcttgatgtgctctacagcaagggc
tccaacatgccagattccgagctgttcgagctgatctccgagaaccgctccatgtcgaag
aagctggaggactacgggggacagaagtccacctccatttctactgcgaaacggctggcc
gagtttcttggtgatcaaatggttaaggacgctggattggcttgcaagtttataatatcc
cgcaagccagacggtgctccggtgaccgagcgagcaataccgctagcgatattccagtcg
cccgcggccgtgaagcggcaccatctgcgacgctggctgaaggacaacactatatccgaa
gatatcgatattagggatgtgctggactgggcctattacatcgagcggctgagcggcgct
atacagaagatcatcactattcccgctgccttgcaagggttagaaaaccccgtgccccgt
gtacaatacccagattggttgcacaagaaaatgatggcaaaaagtgataagttcaagacg
aggaagatcacggatatgttcagcgctaagcctaaggaggtgaaagaagtagattctgat
gatgaaggtgatgttgctgaagatgcagctgtgatggatactgataagaacttactgatg
gatatggaagacattggcaaggagggctcaagtaaagacataaggccggtggtacacaag
gtgaagcgaaagagggagcagtcgccggctaaggagtttgccacgtggagggaggcgctc
ggtgcaccaccgccttttgggactactaaggaagaacatctagcctggattgtgttccaa
aagaagaagtggatgtggcaaatggaacagcgaggattgcggaacagaagtaaaaaaggt
cgattagataaagacgcagcacttcccaaaaatgtgggatctaccaataccttgggagga
tttattaaacgggctcaacggactttacttaacacaccgtggcagattatacagggacag
acgctctgccctgctcttcgtctcagccgtattatcccacagatgtcggagacagctgag
gcggggttgttccgcgtgtgggcgctagttggctcggagctgcaccagataaagctgagc
gtgccgcggatattctacgtgaaccggcgcgtaccgctggccaccgacagcggcgagtac
tggcgccgcgtgagccgggtactgcctcgtgcgcgaccggccatgcacctctaccaatac
accgtgcccgagcgactgtacagggagcgctctcaagaactaatgagtgagctctccgcg
cccgagattgagggtatatacgaaacacagatgagcctagagttccgagtgctcgtgaag
ctgggatgcgtttgtgctgtagacccccaggaagcaagaaaattaatacaatttggttcg
aacaacatggacacctttacaattaatcagttgctgtttaaaggcgtcgcgcatgaaccg
tatttacaaagaaaggatggtgtatctccagtgaagcacatattcctgtaccaacactcg
acgcccaactcgagccgcagcatgtgggccatgataatgggacctattaagcgggcctac
atctttgtacaggactctgtcaaaaccaaccaagtgcctaatatgaacacattgtattcc
gctgaacggattgccaagataaaccttggaacagacgaaaccattttgcccagcgctgaa
ttgcattgggaggtgtctgtagaaacagattctcgcgcagtgtaccgcggcatccaacgc
gctctgcagcggtaccgggacgagaagtgtggacccaccatgttggcgcttcagagcacg
ctatcgtccgccgctctgctcgctcttatgccggtattgtcagagttcccgcttgtgcca
ctgcacgtgcgcgacgtagagtcgttgtacagcacactagagtggcagcggattggcgcg
cgggccatcgtcagacattatctcaacctggactctgtactcacactcaccatcaaacag
tgcagatatttgggtatccccgtgggcaatatgcccgcagacccaacgcttttcggcgca
gatctcttctatgcgagacatctccttaaacacaacttcgttctttggtgttcgagtctg
gagcggcctgatctcggtggtagagaaatcgatgacaataggttggtgagtgaaaccgac
gacagcagtaggtgcgtgcacaacgcgagcggagcgtacggcggtgtgtgcgtgtctctt
gaaacggacgcgctgtgcgtatgtgcactgcttcaggcgcatcatatactgcaggtggaa
ggaacaagcgtggcgacgtcgtttggagctcagcacgctaatattcaggatgttatggcc
aacactggttcgaacgccacgctgaactacgatgagaccgcgcagtgcagcgccgcgttc
aaagtcctccgaaccatgatcgcggcttggctccgggacgtcacggtctacaagaacgtc
ttcgccgacttccagatatcgcacttctacagatggctgaagacacccacatctctgctt
tacgatcccgccctacgccggacgctgtacagcctgatgaagaggttgttcctcatgctg
gtggcagagttcaggcggctgggctcgcagatcgtgtacgcggacttcaacaagatcata
cttcacaccaacaagagtaacgtcatggacggaattggttacgtggagtttgtagtgcaa
agtatccggaataaagaactgttccacggtattgatatacgttacaaagagtgctggtca
cacctgctatggctggaccaggctaattttgcgggcatacagggcaaactaccggaggga
ctggtggaagtgggctcatcacaagttgctcagagtactgaagaatcgtccgaagatgaa
ggtgcaatatcgatgcaatggaacctcgctacgtaccttggtcgtggagtgcagcaacac
ttctacaccgcggccgccggcttcctgagtgccgcccacgcggaaccagaccggctgcgg
gaactgcttgccggagagatatcgcagaaactattccagataacggagaagataaagaat
cgcatgccgaccctgcggctgaccgacatcggacctcagcccggcttcaaggcggaggtc
ctggagggaaccacgcccgccctcttgttcgtcaacgctgtgtgcaaggtgttctctctg
gacgaatcgcttgccgaacaggtaactctgttgcgccgtaacctattgcgactgatcggc
gtcggcgagttcagcccgctggcggagtggcgcgacgcgtgcgcgagctgcgtcctgtgc
gaggtgatctgcaaggcgtgcaaccattgccgcgacctggacctctgtctcactaccgac
acggcgctgcagaacaacgtaccggtatgtctgtgccccacttgtggaactgcatacgag
aaccaggagttggagtggagattgattgagatattgaacaggcgagccatgtcgtacaca
ctgcaggatctcatatgcaccagatgtaatcaggttaaaagagaaaacttatcaatagta
tgtgattgtgcgggcgaatttaaactgatgctgcctatcaaagaaattaaatcacaatta
gcaacattcaagaccattgcagagtattacaggatgcctttgttatcagagaatattgaa
tttaatttaagcaacatgtga

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