Leptidea sinapis (Wood White): 126964872
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Entry
126964872 CDS
T09272
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03013
Nucleocytoplasmic transport
lsin03015
mRNA surveillance pathway
lsin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126964872
09122 Translation
03013 Nucleocytoplasmic transport
126964872
03015 mRNA surveillance pathway
126964872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126964872
03041 Spliceosome [BR:
lsin03041
]
126964872
03009 Ribosome biogenesis [BR:
lsin03009
]
126964872
03012 Translation factors [BR:
lsin03012
]
126964872
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126964872
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126964872
mRNA cycle factors
Stress granule specific factors
126964872
Spliceosome [BR:
lsin03041
]
Complex C
Other components
EJC/TREX
126964872
Ribosome biogenesis [BR:
lsin03009
]
Eukaryotic type
90S particles
Helicases
126964872
Translation factors [BR:
lsin03012
]
Eukaryotic type
Initiation factors
eIF-4
126964872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
UvrD-helicase
TniB
AAA_30
Utp25_C
Motif
Other DBs
NCBI-GeneID:
126964872
NCBI-ProteinID:
XP_050664148
LinkDB
All DBs
Position
6:complement(2038562..2040904)
Genome browser
AA seq
405 aa
AA seq
DB search
MTASEVSHNRKIISEDLSNVEFDTSEDVEVIPTFDTMGLRDELLRGIYTYGFEKPSAIQQ
RSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVI
LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSS
MHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacggcatcggaagtatctcacaatcgcaaaataatatcagaagatttgtctaatgtc
gaattcgacactagtgaagatgtggaagttatcccgacatttgatactatgggattgcgt
gacgaactacttcggggaatatacacatacggttttgagaaaccatcagccattcaacaa
cgtagtatcctacccattgtaaaagggagagatgtcattgcacaagcacaatcaggaacg
ggcaagactgcaacattctcaatttcaatactgcagtcactggacactactctcagagag
acacaagtgttagtgctgtcccctaccagagaattggcaacacagattcagaaagtaatc
cttgctttgggagacttcatgaatgttcaatgtcatgcctgtattggaggaactaatttg
ggtgaagacataagaaaactagactatgggcagcatgttgtctcaggaacaccaggaaga
gtatttgatatgattcgaagacgtgttttgagaacaagatctatcaaaatgttagtgctt
gatgaagccgatgagatgttgaacaaaggtttcaaagaacagatttatgatgtttatcgt
tatttaccaccagcaacacaagttgttctcatatcagctacattgccacatgagattctt
gaaatgacatctaagtttatgacagatcctataagaattttggtgaagcgtgacgagttg
acactagaaggcataaaacagttctttgtagctgtcgaacgtgaggagtggaagtttgac
acactgtgtgatctgtatgatacactgacaatcacacaggcagttatattttgtaacact
aagaggaaggtagattggctgacccagaagatgcaagaagcaaactttacagtcagttcc
atgcatggtgatatgccacaaaaggaaagagataatataatgaaggaattccgatcgggc
caaagccgtgtactaatcacaactgatgtatgggcaagaggaattgatgttcaacaagtg
tcattggtcatcaactatgatttacccaacaatcgtgagttgtatatccacagaattggc
agatctggccgttttggacgtaagggtgttgcaataaactttgtgaagtctgatgacatc
aggatcttgagagacattgagcagtactattctacacagattgatgagatgccaatgaat
gttgctgatttaatctaa
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