Leptidea sinapis (Wood White): 126964956
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Entry
126964956 CDS
T09272
Name
(RefSeq) nuclear pore complex protein Nup154
KO
K14312
nuclear pore complex protein Nup155
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126964956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126964956
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126964956
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Utp8_b_propeller
Motif
Other DBs
NCBI-GeneID:
126964956
NCBI-ProteinID:
XP_050664267
LinkDB
All DBs
Position
6:8209052..8247304
Genome browser
AA seq
1351 aa
AA seq
DB search
MPSLNNSNVGPRQPENSKMQLESLELAGCTLDRYITCDNSRPSFLEITGIAAQGTPTCSG
LNAGDYRNLAALLNHANLSQLKIVNKVSLPPEIMEHFAHMQCHCLMGVFPEISRVWLAID
SNIYVWAFEHGSDVAYFDGLGETIVSVGLVKPKPGVFQSFVKYLLVLTTTVEIVVLGVTF
SSSKQDGSTELEEIHLVPEPVFVLPTDGVSMLCVKSTSKGRMFLGGKDGCLYEITYQAQL
GWFGKHCKKINHSTSALSFLVPSFLNAALYDEDPIVKIEVDNSRHIIYTLSEKGCIEVFD
MGYDGESMCRVTRLSQSKIVSAATEVVKTVEASNFKPVIAISAVEESESEHLNLVAITQA
GARLYFTTGISDPSQGRPNSRPLDLILLHVRLPPGFTPNASVLKPKQVHNAVYDNGTLVM
VCSTGGGEAETLWCLSRALGGAAFSEAHSLLPLDGPVWALTSIPTVQDALLSPALLAKKD
LWSGSRWAVVSAWGAALIAAGSPPDLLRTLLRDYRGPDAQPVKDFFQLQGYDLACACALY
LACEDTSSGDMSISEWASRAFLIYGSHVAPSLQMTQQSSHLPSMSSPKFSPRQVSTPMTI
RGQEQIRTNQSYQQTQMNQSMGIGNQSMLPSSPYQQNLRSPTGFNQSSLTGNVTQQARDY
QLQVEYSAKHNALYIYIGRVLAPIWNLKCVTKSLTPDKTEFMLSNVTGEDCAFVARKLQR
AASFLQRVVASHAQNTDEAASIQALKVFIGMAIEMLSLWKVLCEHQFHVIAASLPPEQQS
ALHAASFRELLVGGQEVACLLLGSLVAGYLRDNASVDGISQKLRQLCPTLYRQEDATCSK
ANELLIFAKQQKNSAERMEMLQQALKLCKDVAPNVNLPLVCSKLLSVGYYSGIVELCVTC
AAKMDPQDRAMYYYKSDQPTQDREGHLLYYKRMEIYREVCNALERLYERSSESNGDTAPA
KVQESTDPLLTLSPADANYQGRKLVSECLSRDDELLHVAVYEWLISKNLGSELVSVSGVA
PASLRTYLTAAARQATGRTALLLLDLLWKVLERAGDHLAAAEVLEGLATRPGTGASLAQR
ISWVSAGVVCVRGAGAAAGAGAAELVRRLEEAAEVARVQAAVRTAAAAASPPPPPHLLRR
LDDLLDITQLYEEYADRYNLWECKLAIVQCSGHNDPLLVENIWSNILSDAEAAASSLLTP
DEKLSSVLSKVTTLGKEYVNSGHCFPLYFIVRQLEIMSCKLQAEKSLVFKTVLKIGVSLE
QVLDIYVKLVSVNERVWLGCGDESHVCAAAAALLRHARTDVAPLPPAARRRALARCKDLH
EAALSALQSRPNTQILIDKLTVAQSYLDRMD
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtctaaataatagtaacgttggacctagacagccagaaaatagtaaaatgcaa
ctcgaatctttagaacttgctggttgcactttagaccggtatattacttgtgataattcc
cgcccttcgtttctggagataactggtattgctgcacaaggtaccccaacatgcagtggc
ttaaatgctggtgattacaggaatctcgcagcattattgaatcatgctaacttatcacag
ctaaagattgtaaataaagtgtcccttccgcctgaaataatggagcactttgcccatatg
caatgccactgccttatgggggtgtttccagaaatcagtcgagtttggcttgcaatagac
agcaacatatatgtctgggcatttgagcatggcagtgatgtggcttattttgatggctta
ggagaaaccattgttagtgtaggccttgtaaaaccaaagccaggagtctttcagagtttc
gttaaatatttgctagtactaacgaccacagttgaaattgttgttttaggggtaacattt
tccagtagcaaacaggatggttcaacagaattggaagagatacatttggtgccagagcct
gtgtttgtattacccaccgacggtgtgtcaatgttatgtgtcaaatccacatccaagggt
agaatgtttttgggtggaaaggatggatgcctttatgaaatcacttatcaggcacagtta
gggtggtttggtaagcactgtaaaaagataaatcattcaaccagtgccctctcgttctta
gtgccttcattcttgaatgctgctctgtacgatgaggatccgattgtgaaaattgaagtg
gataactcccgtcatataatctacacgctaagtgaaaagggatgtatagaagtatttgat
atgggttatgatggtgaaagtatgtgtagagtaacgaggctgagtcagagcaaaattgtg
tcggcagccacagaagtagtaaagacagttgaggcgagtaattttaagcccgtaatagca
atatcagctgtggaggaatccgagtcggagcatttgaatctagttgctatcacacaggct
ggagcaagattgtacttcactactggaatttctgatcccagtcaaggaagacccaatagt
agaccactagatctaatactgcttcatgtaagactaccacctggatttacaccaaatgct
tcagtgttgaaacccaaacaagtacacaatgctgtgtatgataatggaacattagtaatg
gtttgctcaactggtggcggtgaagctgaaacactgtggtgtttgtcgcgggcgttaggt
ggcgctgcatttagcgaagcacattcccttctgccccttgatggtcctgtttgggctctg
acgtcaatacccaccgtccaagatgcattattatctcccgcactgcttgccaagaaagat
ctgtggtctgggtcccgttgggctgtcgtgagtgcatggggtgcagcgttgatagccgcg
ggttcgcctccagacttactccgaactttattgagagactatcgcggacccgacgcacag
cccgttaaagatttttttcagcttcaagggtacgacctggcctgcgcatgcgcattgtat
cttgcctgcgaggacacgtccagtggtgacatgtccataagtgaatgggcttcaagagcc
tttcttatttacggcagccacgtagcaccctccttgcagatgacccaacagtcttcacat
ctaccttctatgagttcaccaaagttttcaccgaggcaggtatcaacaccgatgacgata
cggggacaagaacaaatcaggacaaatcaatcataccaacaaacacagatgaatcaatca
atgggcatcggaaaccagtccatgttgccatcatctccttaccaacaaaacttgaggagt
cctacaggattcaaccagtcttcgttgactgggaatgtcacccaacaagccagagattac
cagttgcaagtggagtatagtgccaaacacaatgccctgtatatatacattggaagggtc
ctagcacctatatggaatttgaaatgtgttacgaaatcactcactccagataaaacggag
tttatgttgagcaacgtgacgggcgaagactgtgcgttcgtggctcgcaagctgcagcga
gcggcgtccttcttgcagagggtggtagcctcgcacgcccagaacaccgacgaagcggcc
tccatacaagcactcaaagtattcatcggcatggcgatagagatgttgagtctatggaag
gtgctgtgtgagcatcagttccacgtgatcgcggccagtttgccccccgagcagcagagc
gcgttacatgccgccagcttcagggaactgctagtgggtggacaagaagtggcgtgcctg
ttactgggctcgctggttgccggttaccttcgggacaacgcctcagtggacgggatctcg
cagaagctgcggcagttatgccccacgctgtaccgacaagaagatgcgacatgttccaag
gcaaacgaattgttaatatttgcaaaacagcagaaaaattcagcagagcggatggaaatg
ttgcaacaggctctgaagctttgcaaggatgttgcaccaaatgtcaatcttcctttggtg
tgttcgaagttattgtctgttggatactactctggcatcgtggagttgtgcgtcacatgc
gcagctaagatggacccccaagacagagccatgtactattacaagagtgaccaaccgaca
caggaccgagagggacatttactatattataagaggatggagatatatcgagaggtatgc
aacgctctggaacgtttgtacgaacgcagctctgaaagcaatggagatacagcaccggct
aaagttcaggagtccactgatccgctactgacgttgtctccggcggacgccaattatcag
ggacgaaaactagtttccgagtgtttatcgagagatgatgagctgttgcatgttgccgta
tacgagtggctcatatccaaaaacttaggctctgaactggtgtctgtgagcggcgtggct
cctgcgtcgctccgcacgtacctgacggcggccgcacgccaggccacgggtcgcaccgcg
ctgctactgctggacttgctctggaaagtattggaacgtgctggagatcacctggcggcc
gctgaagttctcgaaggactggctactcgacctgggactggtgcgagcctggcgcagcgc
atctcgtgggtgtctgcgggcgtggtgtgcgtgcggggggcgggcgccgccgccggtgcg
ggcgcggccgagttggtgcggcggctggaggaggcggccgaggtggcgcgggtacaggcg
gccgtgaggaccgcagccgccgcggccagcccgccgccgccgccgcacctgctgcggcga
ctggacgacctgctcgacatcacgcagctttacgaagagtatgcagaccgctacaacctg
tgggagtgtaagctggcgatagtgcagtgctcgggtcacaacgaccctctgctagtcgag
aacatctggagcaacattctgtcggacgcggaggcagccgcgtccagcctgctcactcct
gacgagaagctgtcttctgtacttagtaaagtgactacactaggaaaagaatacgttaat
tcgggccattgcttcccattgtacttcatcgtccgccagctggagataatgagttgcaag
ttacaggccgagaagagtttagtgtttaagactgtgttgaagatcggcgtgtctctggaa
caagttttagatatatatgtcaagctggtgagcgtgaacgagcgcgtgtggctggggtgc
ggcgacgagtcgcacgtgtgtgcggcggcggcggcgctactgcggcacgctcgtacggac
gtggcgccgctcccgcccgccgcacgacgccgggccctcgcacggtgcaaggacctgcac
gaggctgcgctgtccgcgctgcagagtcgaccgaacactcagatcctcattgataagcta
acagtggcacaatcatacctagatagaatggactaa
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