Leptidea sinapis (Wood White): 126964961
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Entry
126964961 CDS
T09272
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
126964961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126964961
Membrane trafficking [BR:
lsin04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126964961
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
Beta-prop_EML_2
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
126964961
NCBI-ProteinID:
XP_050664275
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Position
6:7214653..7239471
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AA seq
1142 aa
AA seq
DB search
MMKSGEPGGQSEMHLSKTPSIQSLLDSDIESVSSYQYGEFEELDEVEYALPASDAPSLEE
ILNCKQLDISEDGIENKHNEPATCSGLHIEVLQAVSQQVAQAEERSSAGPATTLSVGTNG
RLTVGTAHGHILSFHDQTLRWVSDKYTDLGAIASLAYNQDGSRLLAGFARGPVYQYESKH
GDVLRKITFSGDIWGTLKVTWAGTGGILLDTGGSVWLMRFTRPLGVRSTKVSCIFSGSRG
EVLALAAKDARILALATHTRIIVVCGGQAAGVKLMGPTHMMPVLEWFDSKSDILVYARGH
FLIWLKLSFTGTTISLQPLKRVELKTVPMFLGWLSPLSAIIFDSTESISIMDDQFDEPLD
LSHIQPVYASAFYKGHWTEGRVSLAMSRAGETALAGACIVDGILTILGRKGIVRVRLRDV
ITRSKMFMSSGHYLEALKLLSSTRGTESVMVAREFVATFIEKPHILCNKNVANEAVKICI
KLGLSDELWSQLWENCSQQTALVEALGDAAVRGDFVDDPPTPDYTQALIERLADVEPDLV
ERVLASLPLTSINVHRASIFTRQRKLWRGVGALVAALDGCSGAMRELTGYVDAACGVRRG
ESCACAGAALVLCAADALAGRSPVARPLPAHALPSARHDALQALLHENQGKSPLRVMVEH
DVSSAMRLLEQCSREPPFAGPLGKQNRLRVARALLTFTTTSGDPQDQERTLEIIEFLGGQ
LQNGALPLDQQLIQNIQDLVASIENEKSDRAWIGILMRMRNQRDQLFADYRNHIERPRIL
WKVDSLIDRHDEAIKQFFDIESPSQQDIDEFFVYIQSIISSSDIRKRLHDFLPKIIELRP
GAVAALLTDEQSSGAVADTMRVLRDERALQFGKCLLDMGRLRGEAATVYLRHLCVSEPAD
VRHFLTKHSGLVRPEDALALVTELGPKDAEPICLEATGDYKGALDALLNMITEDDQERVA
MEACELCVRVCGTVPRADGQEMWTRLLRHLPAVPPALVFEAFAYLPLEELLSKTVNSVQV
RRILADGANGLAAWECAKRIAGVEAHEALARSLVEARRGVAVRAPCVRCGEKLDSRVGIR
TAHCSRAYHADCDVYPICHCGKRLPTNILNLPPSLPHSRQLDNPLDSLQVVAPPRPDLEG
VV
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatcaggagagcccggaggacaatctgaaatgcatttgtctaaaaccccatct
atccaatcattattagattctgatatagagtctgtttcaagttatcagtatggagagttt
gaagagttggatgaagtggagtatgcactcccagctagtgatgctccatctctggaagag
attctgaactgtaagcagctagatatatctgaggatggtattgagaataaacataatgaa
ccagccacatgctcaggccttcatattgaagttctacaagcagtttcccaacaagttgct
caagcggaggaacgttcatcagctggacctgcaacaactcttagtgttggcactaatgga
agactcactgtaggaacagctcatggtcatatactgtcatttcacgaccagactctaaga
tgggtgtcggataagtatacagacctaggagctatagccagtttagcatataaccaagat
ggcagtaggcttttggcaggcttcgcccgaggccctgtttaccagtatgaaagtaaacat
ggtgatgttttgcgtaaaataacatttagtggagatatttggggtactttgaaggttaca
tgggcgggtaccggtggtatcctattggatacaggcggatctgtgtggctgatgagattt
acaagacccttgggtgtacgttctacaaaagtatcatgtatattctctggttcaagagga
gaagttcttgctttggcagcaaaggatgctcgcatcttggcattggcgacacatacccgt
ataattgttgtttgcggcggtcaggctgcaggagtgaagctaatgggcccaactcacatg
atgcctgttcttgagtggtttgactctaaaagcgatatattagtttatgctcggggacat
tttttgatatggcttaagttatcttttactggaacaacaataagcctgcaacctctaaag
cgtgttgagttgaagacagtgccaatgtttttgggatggctctcacctctgagtgcgata
atatttgactctactgagagcattagtattatggatgatcaatttgatgagccattggat
ctctcccatatacagccagtatatgcatctgcattttataagggtcactggacagaggga
agggtttcacttgccatgagcagggcaggcgaaacagcactggcaggcgcttgtatagtt
gatggcatattaacaatccttggacgaaaaggcatcgtgagggtccggcttcgagatgtt
ataaccagatctaaaatgttcatgtcttctggtcattatttggaagcgttgaaactgcta
agctcgacccggggaactgaatctgttatggttgcaagagaatttgtagctacttttata
gagaaaccccatatattatgtaacaagaatgttgctaatgaagctgtgaagatttgtatt
aagcttggattaagtgacgaactgtggtctcagctgtgggagaattgttctcagcagaca
gcactggtcgaggcactgggggacgcggccgtgcgaggggatttcgtagatgacccgcca
acgccggattatacccaagctttaattgagagattggcggacgtggaaccagacttggtg
gagcgagtgttggcctcgcttccgttgacgtccatcaatgtccaccgagccagcatattt
acgaggcagaggaaactgtggcgcggcgtgggggccttagtagccgctttggacgggtgc
agcggcgccatgcgcgagctgacggggtacgtggacgcggcgtgcggagtgcggcgcggg
gagtcgtgcgcatgcgccggcgccgcgctcgtgttgtgcgccgcggacgcgttggccggc
cgctcgccagtcgctcggccgctgcctgcgcatgcgctcccctctgcccgccacgacgcg
ttacaagcgctcttgcacgaaaaccaaggcaagtccccgctgcgcgtgatggtggaacat
gatgtcagctcggccatgcgcctgctggagcagtgctcccgggagccgcccttcgccggc
ccgctgggcaagcagaacaggttgcgggtggctcgcgccctgctgaccttcaccaccacc
tccggggaccctcaggaccaagagagaaccctggaaatcatagaattcctcggagggcaa
ctacaaaacggggcgttgcctctcgatcaacagcttattcaaaatattcaagatcttgta
gcgtctatagaaaatgaaaaatcagatcgcgcttggattggaattttaatgcgcatgcgc
aatcagagggaccaactcttcgcggattacaggaaccacatcgaacggccacgcattctg
tggaaggtagactcgctgattgatcgccacgacgaagccatcaagcagttcttcgacatc
gaatcaccatcgcaacaagatatagacgagttcttcgtgtacattcaatcgataatttct
agttcggacattaggaagcgtttacacgacttcctgccgaagattattgaattgcgaccg
ggagccgtggccgcgctactcacagacgagcagtcgagcggggccgtggcggacacaatg
cgagtgttgagagacgagcgagcccttcagttcggtaagtgtcttctagatatgggacgg
ctgaggggagaggcggccaccgtatacctgcgacacctgtgcgtgtcggaaccggctgac
gtcagacacttcttgaccaagcactccggcttagtgagaccggaagacgctctcgcgctg
gtgacagagctggggccgaaagacgccgaaccgatctgtttggaagcgaccggagactac
aagggtgcactggacgctctcttgaacatgatcactgaagacgaccaggagcgtgtcgcc
atggaggcgtgcgaactttgcgtgcgcgtgtgcggcaccgtgccgcgggccgacggccag
gagatgtggacgcggctcctgcgacacctccccgccgtgccgcccgcgctcgtcttcgaa
gccttcgcttatttgccgcttgaggagttgctttcaaaaactgttaactcggtgcaggtg
aggaggatattggctgatggagctaacgggctagctgcttgggagtgcgccaagaggatt
gctggagtggaagcacacgaggccctggcgcgttcgctcgtggaggctcgccggggagtc
gcagtgcgggcgccgtgcgtgcgctgtggagagaaactggactctcgcgtcggaatccga
acggcgcattgctcaagagcgtaccacgccgactgtgacgtatacccgatatgtcactgc
gggaagcggcttccaacaaatattctcaacttgccaccatccctcccacattcacgacaa
ctcgacaaccccctcgatagcctgcaagtggtcgctccgccccggcctgatcttgagggt
gtggtgtag
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