Leptidea sinapis (Wood White): 126965203
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Entry
126965203 CDS
T09272
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126965203
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126965203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
126965203
NCBI-ProteinID:
XP_050664600
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All DBs
Position
6:4827116..4875981
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AA seq
1310 aa
AA seq
DB search
MENSFFEFRDKTDMQDDSVCEIIDNSLMDESFAPKKTPAKKNQTLYIPESDDSVADGTEG
SEDEISESRSKSKSSSWTNTNVVCRSNDDDTEGQNQNFNRCPRKMVFSSSDDEDSPCPSA
RESSSPFIVRRVKALRSSDSFIGHRKKKRIMLLDSDSDNSIIIEHNRQRKMICLKETPHK
EEVKNNSKRNMSFRSTGSECDESDSNEDDNSNVTNAEEPVNQSNKHDALNNDDLDISNGR
ENESNPLPSKHSDSGGTVVYDQEDSSVADDQDDQKFTSRATRTKDDVTNNDDLVVSNNLD
NESNLIGSKDNDSEGTIEYDHEDSAETDDQDDQMFVSRATRMSIMGVIPKDGSDESDFIQ
SDSSRPASSLDELPDCGLSVTKSAQKNNPDDVDDSKLTCSPFSSPLQDITNRENGYALKS
EAENSFNKSITKSNARKRLNNDSITQSNVEENFDDSVSQSNVIDLTHIETDGLKGKVAKR
LHVIDDDVTIIDKEPEVIHLSSDSEDELKAEKSPSSKRSPSAKRPAEKNKSSVTKKVGSD
IKQYLEVGARSNVPASYPNQVEYVRRHVRDRELNKLNELRQEMQNVKYLLESMDTSSLPD
GGVKLITKLKDLEAEVRRKGDRVANMIVETDEPVIMVGDKDEGLTWDDIQKASNEVQPRM
FGKQAMTTHLAERNLILERLRELYQSLESCPPEHKIAKPPRSLQTKLMQHQQHALAWLHW
RETQNPCGGILADDMGLGKTITMISLIASDKEQDKDDGDDKGDGDKKRNRLVRGGTLVVC
PASLMQQWAGEVNKHCVSHSLSVILHHGAQRATQPHRLANSDMILTTYNILQRETEKGGV
LTRIHWRRIILDEAHAVRNHKSATSSAVSALNGKRRWALTGTPLHNKDLDLFALLKFLKC
TPFDELTMWKKWIDNKSKGGQERLSTIMRCVMLRRTKQQLQEKGQLDCLPERSTHQCAVT
LAKEEMNVYQKVLVFSKTLFAQFLHQRAEKQADNFVSNTTRDTAYYKMHKKMIALQGAKP
VKSHEILVLLLRLRQVCCHCGLIGAMLDEDSADLDEDPAGKDLLAELNKLSLEEGRSKRM
SRISIDSQDDEVEEPPVEGTTVAEAIRSVLSPKNPVFNLERRSSKITAVMDCLNKNVFSN
KGEKAVVVSQWTSVLRLVERELAHAGVPTVTLNGSVAVPARPPLIQRLNDESSDVRVMLL
SLCAGGVGLNLCGANHLLLLDPHWNPQLEQQAQDRIYRVGQRRPVHIYRFMCVDTVEQSI
RKLQEAKLELAENVLTGARHTNASKLTIEDLKVLFNMAPQVDDLDDSITY
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattcattttttgagtttcgggacaaaaccgatatgcaagacgactctgtttgt
gaaattattgacaacagtcttatggatgaatcttttgctcctaagaaaacacctgcaaaa
aagaatcaaactctgtacatccctgaatcagatgattcggtggcagacggcacagaagga
tctgaggatgaaatatcagaaagcagatccaaatctaaatcaagcagttggaccaacact
aatgtcgtgtgcaggagtaatgatgatgatacagaaggtcaaaatcaaaattttaataga
tgtccaagaaaaatggtttttagttcatcagatgatgaggattcaccctgtccgtctgca
agagaatcgtcaagtccatttattgtacggagggttaaagcactgcggtcgtcagattcc
ttcataggacacagaaagaaaaaacgtataatgcttctcgattctgattcagacaattcg
atcataattgaacataatcgtcaaagaaagatgatttgtttaaaggaaacaccacataaa
gaagaagttaaaaataatagtaaaagaaacatgagctttcgaagtactggtagtgaatgt
gacgaatctgattcaaatgaagatgataattctaacgtaacaaacgcggaggaacctgtt
aaccaatcaaataaacatgatgcactaaataacgacgatttagatataagtaatggtcgt
gaaaatgaatcaaatccgttaccgagtaaacacagtgacagtggcggaaccgttgtatat
gatcaagaagatagtagtgtggcagatgaccaagacgaccaaaagtttacgtctcgggct
acacgaacaaaagatgatgtaaccaataacgatgatttagttgttagtaataatcttgat
aatgaatcaaatctaataggtagtaaagataatgacagtgaaggtaccattgaatatgat
cacgaagatagtgcagagacagatgaccaagatgaccaaatgtttgtatctcgggctaca
cgaatgagtataatgggtgtgataccaaaagatggaagtgacgaatcagactttatacaa
tccgattcttcgcggcctgcttcgagcctcgacgagttacctgactgtggtctcagtgta
acgaaatctgcacaaaaaaacaaccccgatgatgtagatgattctaaactaacttgctct
ccattctcaagccctttacaagatataacaaatagagaaaatggttatgcattaaagagt
gaagctgaaaatagttttaataaaagtattacaaagagtaatgcaagaaaaaggcttaat
aacgacagcattacgcaaagtaatgtagaagaaaatttcgatgacagtgtttcgcagagt
aacgttatcgatctgactcatatagagacagatggcttgaagggcaaagttgccaagagg
ttacacgtaattgatgacgatgtcacaatcattgataaggagcctgaagtgattcattta
agcagtgatagtgaggatgagctgaaagccgagaagtcgccgtcatcaaaaagatcgccg
tcagcaaagagacctgccgaaaaaaataaatctagtgtcactaagaaggttggcagtgat
ataaaacaatatctagaggttggcgcccgcagtaatgtaccggcctcgtatccgaaccag
gtggagtatgtgaggaggcatgtgagagaccgagagctgaacaaacttaacgagctgagg
caagaaatgcaaaatgttaagtacttactggagtcgatggatacctcttcactgccagat
ggtggcgtgaagttgattacgaaacttaaagacctggaggcggaggtgcgacgcaagggg
gaccgcgtggcaaacatgattgtggagacagatgagcctgtgatcatggttggtgacaag
gatgagggacttacctgggacgacatacaaaaggccagtaacgaagtacaaccgcgaatg
tttggcaaacaggcaatgaccacgcacctggctgaaaggaacctcatcctggagcgtctc
cgcgagctgtaccagtcgttggagtcgtgtcctccggagcacaagatagcgaaacccccg
cgatccttgcagaccaagctgatgcagcaccagcaacacgcgctcgcctggctccattgg
cgggagacgcagaatccgtgtggaggcattcttgctgatgatatgggtctcggcaagacc
atcactatgatatctctaatagcaagtgataaggaacaagataaggatgatggtgatgat
aaaggtgatggagataagaagagaaatagattggttcggggcggcactctagtggtgtgc
ccggcgtccctgatgcagcagtgggcgggggaagtcaacaaacactgtgtgtctcactcg
ctctcggtgatcctccaccacggcgcgcagagagcgacgcagccgcaccgactggccaac
tccgacatgatactcactacgtacaacattctgcagcgggagactgagaagggcggagtt
ctaacccgcatacattggcgtcgcataatcctcgacgaggcgcacgccgtacggaaccac
aagtcggcaacctcgagcgctgtttcggccctcaacggcaagaggcgatgggcgctcacg
ggcactcctctgcacaataaggatctggatctgtttgccttactcaagtttctcaagtgc
acgccctttgatgaactaacaatgtggaagaaatggatcgacaacaagagcaagggcggc
caagagcggctgagcacgatcatgcggtgcgtgatgctgaggcgcaccaagcagcagctg
caagagaagggtcagctggactgtctgccagagaggagcacgcaccagtgtgcggtgacc
ctcgccaaggaggagatgaacgtctaccagaaggtgcttgtgttctcgaagacactattc
gcgcagttccttcaccagcgcgctgagaaacaggcggacaacttcgtgagtaacaccact
cgcgacaccgcctactacaagatgcacaagaaaatgatcgcccttcaaggtgctaagccg
gtcaaatcgcacgagatcctggtgctactcctgcgactgcgacaagtgtgttgccactgc
ggcctgataggagccatgttggacgaggactcggccgacctggatgaagatcctgctgga
aaggatctgctggctgagctcaacaagctatccctggaggaaggccgaagcaagaggatg
agtcgcatcagcattgattcacaagatgatgaagttgaggagccccctgtagagggcacc
actgtggccgaagcaatccgctccgtgctgtctcctaagaaccctgtcttcaacttggag
aggcgctcctccaagataacagccgtcatggactgtcttaacaaaaacgtcttttcaaac
aaaggggagaaggcggttgtggtgtcgcagtggacatcggtgttgcggctggtggagcga
gagttggcccacgcgggggtgcccactgtcacgctcaacggctccgtggcggtgccagcg
aggccgccgctcatacagcggctgaacgacgagagcagtgacgtcagggtgatgctacta
tccctgtgtgcgggcggcgtcggtctgaacctgtgcggcgccaaccacctgctgctgctg
gaccctcactggaacccgcagctggagcagcaggctcaggaccggatctaccgcgtgggg
cagcggcgcccggtgcacatctacaggttcatgtgtgtggacaccgtggagcagtccatc
cgaaagctgcaggaagccaagctagaactggcggagaacgtgctgaccggcgctcgacat
accaacgcatccaagttgaccatcgaagatctgaaggtcctgtttaacatggctccacaa
gtggatgatttagatgactcaattacctactaa
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