Leptidea sinapis (Wood White): 126965616
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Entry
126965616 CDS
T09272
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsin03016
]
126965616
Transfer RNA biogenesis [BR:
lsin03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
126965616
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF12
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
126965616
NCBI-ProteinID:
XP_050665246
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Position
1:28982588..29004166
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AA seq
765 aa
AA seq
DB search
MKTSVRQVYTSVACNRTPEILDWNKEGFMCFGASNSVVIYDTNVKGKDPLIVLCQHQSRV
NNVKWLRKPDGSSTELVSASADKTAVVWSLKDGAWRATSNLLGHQDSVTTVYGIYTGDDE
LTVFTGSIDSTVKVWTRCNDTMLLKQTISLNSGLCLTIHAQILPAVKKPLLFLALDDNKI
HVFALNSDYHRVDTLVGHEDWVRGVDSYIEDKAVLLASASQDTYIRLWRIQEYYDEPSGS
GIRMEDKTFIAYGVLWSVKLDAVLAGHEGWVYGVHWDCINEIGNKQKRQQLLSSSLDKTI
IIWQQENTGAWVETVRVGEVGGNGLGFYGSKFGPNAFVGHGYNGSLHMWKYDKETGKYDP
SVVVGGHFGGVEAVCWEPSGQYLLSVSQDQTARVHAPWKRPDGSTEWHEVARPQVHGYDL
TAAAAVSPDMYVSAADEKLLRVFRATNNFVDNLHRITGVTLVEREGDTGPEGASVPSLGL
SNKAVFTGDDLTQRDDDNDGYFVPVQLHGPPTEETLMQNTLWPEVQKLYGHGYEVFCVDV
SPDGSLLASACRATTPEHAAVLLWEVTNWQQIQKLVHHSLTVTQLAFSPNSRFLLSVSRD
RKWSLFIRKSNTENRFELAAYTDKTNGIHARIIWCCAWISDSKKFLTGSRDGKVCVWSQT
PIMSETSLSVYVLYNKLGLDTSVTSLAATAHSNRVIIAVGLDTGLINLYHLGHEWTLLLQ
MDHSSAHHMTVKRLAFRPRESDDEEVLLASGGADGFVRIHRLRAA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatctgtacggcaagtatacacatctgttgcttgtaaccgtactccagaaatt
ttagactggaacaaggaaggtttcatgtgctttggagcaagcaattctgttgttatttat
gatacgaatgttaaaggcaaagaccccctgattgtgctctgtcagcatcaatctagagta
aacaatgtgaagtggttacgaaagccagatggctcgtcaactgagctggtatcagcttca
gctgataaaactgcagttgtttggtctctcaaagatggagcatggagggcaaccagtaat
ctgctggggcatcaagacagtgttaccacagtttatggtatttacactggagatgatgaa
ctaactgtgttcactggttctattgactctactgtaaaagtttggacaagatgcaatgat
acaatgttattaaaacagacaatcagtcttaactctggcttgtgcctgaccattcatgct
caaattctccctgctgttaagaagcctctactatttttagcattggatgataataaaata
catgtgtttgctttaaatagtgactatcatagagtggacacattggttggtcatgaagat
tgggtgagaggagtggatagttatattgaagacaaagctgtgctattggcatctgcatca
caagatacttacattcgcttatggagaatccaagaatactatgatgaaccatcgggatct
ggtatcaggatggaggataaaacatttattgcatacggtgtattgtggtctgtcaaactt
gatgcagttcttgctggccatgaaggatgggtgtatggagtacattgggattgtattaat
gaaataggtaataaacaaaagaggcagcagttgctttcatcttcattggacaagactata
ataatctggcagcaggagaatactggggcgtgggtggagactgttagagtgggagaagtt
ggaggaaacggacttggcttctatggtagcaaatttggacccaatgcctttgtgggccat
ggatacaatggctcccttcatatgtggaaatatgataaggaaacagggaaatatgatcca
agtgtggtggtgggggggcatttcggcggagtggaggccgtgtgctgggagcctagcggc
cagtacctgctgtcggtgtcgcaggaccaaaccgccagagtgcacgcgccctggaagcgg
cctgatggcagcacggagtggcacgaggtggcgcggccccaggtgcacggatatgacctg
accgcggccgcggcggtgtcccccgacatgtacgtgtcggctgctgacgagaagcttctg
cgagtgttccgcgccaccaacaacttcgtagacaacctgcacagaatcacgggtgtcaca
ctcgtcgagcgagaaggagatacaggtccagaaggagcatcagtgccatccctaggtctg
tccaataaggcggtgttcaccggtgatgacttaacacagagagatgatgataacgacgga
tacttcgtgcctgtgcagcttcatgggccgccaactgaagagacgctgatgcaaaacact
ctgtggccggaagttcagaagctgtacgggcacgggtacgaggtgttctgtgtggacgtg
agtccggacggctccctgctagcgtccgcgtgtcgcgctaccacgcccgagcacgccgcc
gtcttactgtgggaagtaacgaactggcaacaaattcagaagctcgtacatcactcactg
acggtcacccagctggccttctcgcctaacagccgattcttgttgtctgtgtcgagggac
cggaagtggagcttattcatcaggaagtctaacaccgaaaacagattcgagctagctgcc
tacacggacaagaccaacggcatacatgcgaggataatctggtgctgcgcttggatttcc
gactctaaaaagttcttgactggctctagggatggtaaggtgtgcgtctggtctcaaact
ccgattatgtccgaaacatcgctgagtgtatatgtcttatacaataaactgggactagac
acctctgtgacgtcactggcagccaccgcacacagcaacagagtgataatcgcggtcggt
ctcgacactggtctcatcaatctgtaccacctgggccacgagtggactctgttgcttcag
atggatcacagttcggcgcaccacatgaccgtcaagaggctggcattccgccctcgagaa
tcggacgatgaagaagtgctgctggcgagcggcggcgccgacggcttcgtgaggatacac
cggctgcgagcggcatag
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